RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 CCDC74AQ96AQ1 378 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 MRRFQ96E11 262 aaKnown RBP11.35□□□□□ -0.59
LSM2-212ENST00000477182 FUT8Q9BYC5 575 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 LRRN3Q9H3W5 708 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 ACSS3Q9H6R3 686 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 ZFATQ9P243 1243 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 GULP1Q9UBP9 304 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 FBXO5Q9UKT4 447 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 CNOT6Q9ULM6 557 aaKnown RBP11.35□□□□□ -0.59
LSM2-212ENST00000477182 DOLKQ9UPQ8 538 aa11.35□□□□□ -0.59
LSM2-212ENST00000477182 EXOC1LA0A1B0GW35 172 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 A0A1W2PQM1 296 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 AGAP14A8MT82 685 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 POC1B-GALNT4F8VUJ3 575 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 YY2O15391 372 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 PYGLP06737 847 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 EIF2B5Q13144 721 aaKnown RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 TYSND1Q2T9J0 566 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 ZNF789Q5FWF6 425 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 AARS2Q5JTZ9 985 aaKnown RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 ZNF648Q5T619 568 aaPredicted RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 GPRC6AQ5T6X5 926 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 ZNF787Q6DD87 383 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 CAPRIN2Q6IMN6 1127 aaKnown RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 ZNF449Q6P9G9 518 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 LVRNQ6Q4G3 990 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 ADAMTSL4Q6UY14 1074 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 SDCCAG8Q86SQ7 713 aaPredicted RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 TRIM74Q86UV6 250 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 HEATR4Q86WZ0 1026 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 CNTN4Q8IWV2 1026 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 LMNTD2Q8IXW0 634 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 PHACTR4Q8IZ21 702 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 NXPE1Q8N323 547 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 C2CD4AQ8NCU7 369 aaPredicted RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 GALNT11Q8NCW6 608 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 OR2W6PQ8NHA6 318 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 GABPB2Q8TAK5 448 aaPredicted RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 GDAP1Q8TB36 358 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 NKD1Q969G9 470 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 GLYATL1Q969I3 302 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 ULK4Q96C45 1275 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 VPS35Q96QK1 796 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 CYTH2Q99418 400 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 FBXO6Q9NRD1 293 aaPredicted RBP11.34□□□□□ -0.59
LSM2-212ENST00000477182 OR1A2Q9Y585 309 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 PSAT1Q9Y617 370 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 POLQO75417 2590 aa11.34□□□□□ -0.59
LSM2-212ENST00000477182 SDK2Q58EX2 2172 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 SPENQ96T58 3664 aaKnown RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 UBA6A0AVT1 1052 aaPredicted RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 A1L4Q6 167 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 PRR19A6NJB7 356 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 MTX2O75431 263 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 NDUFS3O75489 264 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 FAM155BO75949 473 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 SLC25A14O95258 325 aaPredicted RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 S1PR4O95977 384 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 NUDT17P0C025 328 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 ACRV1P26436 265 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 TEAD1P28347 426 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 AKT1P31749 480 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 PPARGP37231 505 aaPredicted RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 DCTP40126 519 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 ETV5P41161 510 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 TTPAP49638 278 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 THOP1P52888 689 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 CDK3Q00526 305 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 NAB1Q13506 487 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 C1orf61Q13536 156 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 KLHL38Q2WGJ6 581 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 KHDC1Q4VXA5 237 aaKnown RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 LYPLAL1Q5VWZ2 237 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 CNSTQ6PJW8 725 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 CERS6Q6ZMG9 384 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 MAMDC2Q7Z304 686 aaPredicted RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 STRA8Q7Z7C7 330 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 LRRC6Q86X45 466 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 PHYKPLQ8IUZ5 450 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 RBFAQ8N0V3 343 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 FSTL5Q8N475 847 aaPredicted RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 EFCAB3Q8N7B9 438 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 TEX19Q8NA77 164 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 APOBEC4Q8WW27 367 aaKnown RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 ANKRD7Q92527 254 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 PAFAH2Q99487 392 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 TTC1Q99614 292 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 APOOQ9BUR5 198 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 LRRC61Q9BV99 259 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 LGR4Q9BXB1 951 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 TEX101Q9BY14 249 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 WDR26Q9H7D7 661 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 PHPT1Q9NRX4 125 aaPredicted RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 SMOXQ9NWM0 555 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 NSMCE4AQ9NXX6 385 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 ZDHHC3Q9NYG2 299 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms