RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 VILLO15195 856 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 RGS14O43566 566 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 WDR47O94967 919 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 RB1P06400 928 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 JAK1P23458 1154 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 HNF1BP35680 557 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 SPAM1P38567 509 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 PBX2P40425 430 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 EPHA5P54756 1037 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 YBX1P67809 324 aaKnown RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 NR6A1Q15406 480 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 ATP6AP1Q15904 470 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 AP5B1Q2VPB7 878 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 TTLL9Q3SXZ7 439 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 GPRC6AQ5T6X5 926 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 TTC23LQ6PF05 361 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 TPGS1Q6ZTW0 290 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 SPRED1Q7Z699 444 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 CBR4Q8N4T8 237 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 AADATQ8N5Z0 425 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 UBTD2Q8WUN7 234 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 ISG20Q96AZ6 181 aaKnown RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 LYSMD1Q96S90 227 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 NSUN3Q9H649 340 aaKnown RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 OLAHQ9NV23 265 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 KLHL42Q9P2K6 505 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 CRLS1Q9UJA2 301 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 SLC8A2Q9UPR5 921 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 ANGPTL3Q9Y5C1 460 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 PCDHB3Q9Y5E6 796 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 RNF103-CHMP3A0A140T963 221 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 EME2A4GXA9 379 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 TAPBPO15533 448 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 SMAD6O43541 496 aaKnown RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 TRIM16O95361 564 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 CLDN7O95471 211 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 G6PDP11413 515 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 ZNF23P17027 643 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 PTPN2P17706 415 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 SERPINA4P29622 427 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 CASP2P42575 452 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 GPM6BQ13491 265 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 B3GNT6Q6ZMB0 384 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 TRIML2Q8N7C3 387 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 DCBLD1Q8N8Z6 715 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 FIBINQ8TAL6 211 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 RMND5BQ96G75 393 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 BOCQ9BWV1 1114 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 CD244Q9BZW8 370 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 RBM38Q9H0Z9 239 aaKnown RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 OPTCQ9UBM4 332 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 MAGEL2Q9UJ55 1249 aa16.15■□□□□ 0.18
TMEM53-208ENST00000476724 EIF3LQ9Y262 564 aaKnown RBP16.15■□□□□ 0.18
TMEM53-208ENST00000476724 ZFC3H1O60293 1989 aaKnown RBP16.14■□□□□ 0.18
TMEM53-208ENST00000476724 SCN8AQ9UQD0 1980 aa16.14■□□□□ 0.18
TMEM53-208ENST00000476724 SAC3D1A6NKF1 404 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 AGAP14A8MT82 685 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 ANKRD28O15084 1053 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 RASAL1O95294 804 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 CBSLP0DN79 551 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 BPIP17213 487 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 OXTRP30559 389 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 CBSP35520 551 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 MAGEA10P43363 369 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 HSPA7P48741 367 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 HTR6P50406 440 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 PWP1Q13610 501 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 MYLK3Q32MK0 819 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 C18orf21Q32NC0 220 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 CDKL4Q5MAI5 379 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 DLEU7Q6UYE1 221 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 OR6K2Q8NGY2 324 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 EGFL8Q99944 293 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 NTMT1Q9BV86 223 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 CLK4Q9HAZ1 481 aaKnown RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 CD320Q9NPF0 282 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 INTS7Q9NVH2 962 aaKnown RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 SLAMF8Q9P0V8 285 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 HCFC2Q9Y5Z7 792 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 PRSS21Q9Y6M0 314 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 EBLN1P0CF75 366 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 MTHFD1P11586 935 aaKnown RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 MYF6P23409 242 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 PIK3CGP48736 1102 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 PLOD1Q02809 727 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 MERTKQ12866 999 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 ABRAXAS2Q15018 415 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 RBBP5Q15291 538 aaKnown RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 SLC2A7Q6PXP3 512 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 GRASPQ7Z6J2 395 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 CMTM8Q8IZV2 173 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 NXPE1Q8N323 547 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 OR2AP1Q8NGE2 309 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 OR8J3Q8NGG0 315 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 ZFP28Q8NHY6 868 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 OSCP1Q8WVF1 389 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 RHBDF1Q96CC6 855 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 ZBTB18Q99592 522 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms