RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 OR4L1Q8NH43 312 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 COG1Q8WTW3 980 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 RMDN2Q96LZ7 410 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 ZNF778Q96MU6 729 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 INSM2Q96T92 566 aaPredicted RBP15.79■□□□□ 0.12
COL1A1-205ENST00000476387 COG4Q9H9E3 785 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 SEMA5BQ9P283 1151 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 ANAPC5Q9UJX4 755 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 SNX12Q9UMY4 172 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 COLEC10Q9Y6Z7 277 aa15.79■□□□□ 0.12
COL1A1-205ENST00000476387 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 IFRD1O00458 451 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 CES2O00748 559 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 NKX2-8O15522 239 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 SUV39H1O43463 412 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 KIF1CO43896 1103 aaKnown RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 PHF2O75151 1096 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 WISP1O95388 367 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 OR56A5P0C7T3 313 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 FGF5P12034 268 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 NELFEP18615 380 aaKnown RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 NDUFS1P28331 727 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 COILP38432 576 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 SEPHS1P49903 392 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 CRADDP78560 199 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 KCNAB2Q13303 367 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 CYP1B1Q16678 543 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 C6orf15Q6UXA7 325 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 UNC5BQ8IZJ1 945 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 LILRA3Q8N6C8 439 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-205ENST00000476387 ACTRT1Q8TDG2 376 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 GRK7Q8WTQ7 553 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 ZFPM2Q8WW38 1151 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 UBXN4Q92575 508 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 SLC41A2Q96JW4 573 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 OR6C1Q96RD1 312 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 CLMPQ9H6B4 373 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 CHRAC1Q9NRG0 131 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 CATSPERZQ9NTU4 200 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 IL17BQ9UHF5 180 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 RPS6KL1Q9Y6S9 549 aa15.78■□□□□ 0.12
COL1A1-205ENST00000476387 TERTO14746 1132 aaKnown RBP15.77■□□□□ 0.12
COL1A1-205ENST00000476387 TCP1P17987 556 aaKnown RBP15.77■□□□□ 0.12
COL1A1-205ENST00000476387 MGAT1P26572 445 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 SH3BP2P78314 561 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 KCNC4Q03721 635 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 RPA4Q13156 261 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 KCNJ11Q14654 390 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 SYTL3Q4VX76 610 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 CAPRIN2Q6IMN6 1127 aaKnown RBP15.77■□□□□ 0.12
COL1A1-205ENST00000476387 LRRC8BQ6P9F7 803 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 FAM92BQ6ZTR7 304 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 PPP1R3BQ86XI6 285 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 STARD8Q92502 1023 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 CD180Q99467 661 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 TSSK1BQ9BXA7 367 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 KIR3DX1Q9H7L2 352 aa15.77■□□□□ 0.12
COL1A1-205ENST00000476387 USP27XA6NNY8 438 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 LIN7AO14910 233 aaPredicted RBP15.76■□□□□ 0.11
COL1A1-205ENST00000476387 PRKAR1AP10644 381 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 ZNF28P17035 718 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 TCN2P20062 427 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 PREPP48147 710 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 FNTAP49354 379 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 CSRP3P50461 194 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 KCTD19Q17RG1 926 aaPredicted RBP15.76■□□□□ 0.11
COL1A1-205ENST00000476387 ARMC6Q6NXE6 501 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 ZNF534Q76KX8 674 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 BPHLQ86WA6 291 aaPredicted RBP15.76■□□□□ 0.11
COL1A1-205ENST00000476387 OOSP2Q86WS3 158 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 KMT5CQ86Y97 462 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 RASGRP3Q8IV61 690 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 OTUD6BQ8N6M0 293 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 APOBEC4Q8WW27 367 aaKnown RBP15.76■□□□□ 0.11
COL1A1-205ENST00000476387 ELMO1Q92556 727 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 STAMBPL1Q96FJ0 436 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 SGSM3Q96HU1 749 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 FCRL4Q96PJ5 515 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 OR52A5Q9H2C5 316 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 MRM3Q9HC36 420 aaKnown RBP15.76■□□□□ 0.11
COL1A1-205ENST00000476387 PDE7BQ9NP56 450 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 SYBUQ9NX95 663 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 SLC24A2Q9UI40 661 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 PRSS21Q9Y6M0 314 aa15.76■□□□□ 0.11
COL1A1-205ENST00000476387 UBR5O95071 2799 aaPredicted RBP15.75■□□□□ 0.11
COL1A1-205ENST00000476387 TCRBV7S3A2A0A539 114 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 OR5K3A6NET4 321 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 ZNF185O15231 689 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 OR1I1O60431 355 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 SPAG6O75602 509 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 KIAA0754O94854 1291 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 MT-ND3P03897 115 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 OAS2P29728 719 aaKnown RBP15.75■□□□□ 0.11
COL1A1-205ENST00000476387 MAGEA6P43360 314 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 CD151P48509 253 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 TTPAP49638 278 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 GNG11P61952 73 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 NFKB2Q00653 900 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms