RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 AIMP2Q13155 320 aaKnown RBP12.21□□□□□ -0.45
SKA3-206ENST00000475251 BCL7AQ4VC05 210 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 SIRPB2Q5JXA9 342 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 IRAK1BP1Q5VVH5 260 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 MLIPQ5VWP3 458 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.45
SKA3-206ENST00000475251 ZNF449Q6P9G9 518 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 SARM1Q6SZW1 724 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 CLEC17AQ6ZS10 378 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 H2AFVQ71UI9 128 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 DET1Q7L5Y6 550 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 CFAP206Q8IYR0 622 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 OR2Y1Q8NGV0 311 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 HM13Q8TCT9 377 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 PPP4R1Q8TF05 950 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.45
SKA3-206ENST00000475251 PTERQ96BW5 349 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 RMDN2Q96LZ7 410 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 TFB2MQ9H5Q4 396 aaKnown RBP12.21□□□□□ -0.45
SKA3-206ENST00000475251 P4HTMQ9NXG6 502 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 UBP1Q9NZI7 540 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 FAM8A1Q9UBU6 413 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 SRPK3Q9UPE1 567 aa12.21□□□□□ -0.45
SKA3-206ENST00000475251 TEP1Q99973 2627 aaKnown RBP12.21□□□□□ -0.46
SKA3-206ENST00000475251 ABCA12Q86UK0 2595 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 A0A1B0GUH1 482 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 C17orf113A0A1B0GUU1 675 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 ARHGAP10A1A4S6 786 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 CFAP99D6REC4 459 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 DDX3YO15523 660 aaKnown RBP12.2□□□□□ -0.46
SKA3-206ENST00000475251 GPR39O43194 453 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 LRRTM2O43300 516 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 OR2B3O76000 313 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 POLBP06746 335 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 EDN3P14138 238 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 ITGA3P26006 1051 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 PTPN3P26045 913 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 DCDP81605 110 aaKnown RBP12.2□□□□□ -0.46
SKA3-206ENST00000475251 TYRO3Q06418 890 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 LLGL1Q15334 1064 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 ZRSR2Q15696 482 aaKnown RBP12.2□□□□□ -0.46
SKA3-206ENST00000475251 SLC1A5Q15758 541 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 RHBDD2Q6NTF9 364 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 CUZD1Q86UP6 607 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 RFX6Q8HWS3 928 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 SLC25A41Q8N5S1 370 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 HEXDCQ8WVB3 486 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 TFB1MQ8WVM0 346 aaKnown RBP12.2□□□□□ -0.46
SKA3-206ENST00000475251 INPP5DQ92835 1189 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 RBM41Q96IZ5 413 aaKnown RBP12.2□□□□□ -0.46
SKA3-206ENST00000475251 TRAPPC9Q96Q05 1148 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 FERD3LQ96RJ6 166 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 VAT1Q99536 393 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 VPS37BQ9H9H4 285 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 IFT80Q9P2H3 777 aaPredicted RBP12.2□□□□□ -0.46
SKA3-206ENST00000475251 LRBAP50851 2863 aa12.2□□□□□ -0.46
SKA3-206ENST00000475251 PIKFYVEQ9Y2I7 2098 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 C2orf81A6NN90 581 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 AGPSO00116 658 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 BTN3A1O00481 513 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 POU3F2P20265 443 aaPredicted RBP12.19□□□□□ -0.46
SKA3-206ENST00000475251 TSFMP43897 325 aaKnown RBP12.19□□□□□ -0.46
SKA3-206ENST00000475251 CD151P48509 253 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 ZBED6P86452 979 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 MPP3Q13368 585 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 NR1I3Q14994 352 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 PRKD1Q15139 912 aaPredicted RBP12.19□□□□□ -0.46
SKA3-206ENST00000475251 NOMO1Q15155 1222 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 ANO6Q4KMQ2 910 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 B3GNTL1Q67FW5 361 aaPredicted RBP12.19□□□□□ -0.46
SKA3-206ENST00000475251 FCRL6Q6DN72 434 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 TLDC1Q6P9B6 456 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 KDELC1Q6UW63 502 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 SPOCD1Q6ZMY3 1216 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 CDHR3Q6ZTQ4 885 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 KCNMB4Q86W47 210 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 AMIGO1Q86WK6 493 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 CPNE8Q86YQ8 564 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 ULK4Q96C45 1275 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 VPS50Q96JG6 964 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 NAP1L5Q96NT1 182 aaPredicted RBP12.19□□□□□ -0.46
SKA3-206ENST00000475251 GBP5Q96PP8 586 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 CHRNA10Q9GZZ6 450 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 ASB8Q9H765 288 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 MVB12BQ9H7P6 319 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 TXLNGQ9NUQ3 528 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 ACTR10Q9NZ32 417 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 KLHL8Q9P2G9 620 aaPredicted RBP12.19□□□□□ -0.46
SKA3-206ENST00000475251 CRLS1Q9UJA2 301 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 NOVA2Q9UNW9 492 aaKnown RBP12.19□□□□□ -0.46
SKA3-206ENST00000475251 OSGIN2Q9Y236 505 aa12.19□□□□□ -0.46
SKA3-206ENST00000475251 BTN3A3O00478 584 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 GAPDHSO14556 408 aaPredicted RBP12.18□□□□□ -0.46
SKA3-206ENST00000475251 ZSCAN9O15535 394 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms