RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 MITFO75030 526 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ENTPD5O75356 428 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RPP40O75818 363 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 IPO13O94829 963 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 HTR1AP08908 422 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CDH1P12830 882 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TBXA2RP21731 343 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 KCNA5P22460 613 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CASP3P42574 277 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 BMXP51813 675 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MYBPC1Q00872 1141 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TCP10Q12799 353 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NR1H3Q13133 447 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 EIF4EBP2Q13542 120 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TRAM2Q15035 370 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 POU4F3Q15319 338 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CNN3Q15417 329 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GRK1Q15835 563 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 EPC2Q52LR7 807 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ZRANB3Q5FWF4 1079 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF484Q5JVG2 852 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MFSD14CQ5VZR4 134 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 AFMIDQ63HM1 303 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NUDT18Q6ZVK8 323 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GPR180Q86V85 440 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GPALPP1Q8IXQ4 340 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 OR2V1Q8NHB1 315 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NANOS1Q8WY41 292 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 PIK3R3Q92569 461 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 STAMQ92783 540 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MAPKAP1Q9BPZ7 522 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MCOLN1Q9GZU1 580 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 COA1Q9GZY4 146 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SPNS1Q9H2V7 528 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MAP10Q9P2G4 905 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NOCTQ9UK39 431 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 AMFRQ9UKV5 643 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 V9GY48 417 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MROH7-TTC4A0A0A0MT08 1334 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 LOC110117498-PIK3R3F6TDL0 507 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 H0YAE9 185 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SCAMP2O15127 329 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DAPK3O43293 454 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CALUO43852 315 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 FKTNO75072 461 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CREG1O75629 220 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DDNO94850 711 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CXCR5P32302 372 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NUTF2P61970 127 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SLAQ13239 276 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CAMK2DQ13557 499 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GANABQ14697 944 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DLG2Q15700 870 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 KYNUQ16719 465 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 AGBL2Q5U5Z8 902 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SLC22A25Q6T423 547 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 THOC6Q86W42 341 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 KIAA2013Q8IYS2 634 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ENTHD1Q8IYW4 607 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RDM1Q8NG50 284 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 OR9A2Q8NGT5 310 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 OR2T3Q8NH03 318 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MFSD3Q96ES6 412 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CCNL2Q96S94 520 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 REG4Q9BYZ8 158 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RMND5AQ9H871 391 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 C17orf75Q9HAS0 396 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TREX1Q9NSU2 369 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 EXD2Q9NVH0 621 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RNF181Q9P0P0 153 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ATP23Q9Y6H3 246 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 A0A0B4J293 547 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 USP17L3A6NCW0 530 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 USP17L4A6NCW7 530 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ADAM20O43506 726 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 GAS7O60861 476 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 B3GAT3O94766 335 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 LCKP06239 509 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 NR2C1P13056 603 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 FDPSP14324 419 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CDKN1AP38936 164 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RPL5P46777 297 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 PRIM2P49643 509 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 PTTG1IPP53801 180 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 EPHA5P54756 1037 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 MAB21L1Q13394 359 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SNX17Q15036 470 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 UAP1Q16222 522 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ARSIQ5FYB1 569 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SLC35D3Q5M8T2 416 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RNLSQ5VYX0 342 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 UGT3A1Q6NUS8 523 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 MBOAT1Q6ZNC8 495 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 OTOAQ7RTW8 1153 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 MIER3Q7Z3K6 550 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 OR2C3Q8N628 320 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SPATA20Q8TB22 786 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SDR42E1Q8WUS8 393 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms