RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CDC23Q9UJX2 597 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 KCND3Q9UK17 655 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 HEBP2Q9Y5Z4 205 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 MGAT4DA6NG13 374 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 IFRD1O00458 451 aaPredicted RBP14.76□□□□□ -0.05
VARS-223ENST00000474643 GAPDHSO14556 408 aaPredicted RBP14.76□□□□□ -0.05
VARS-223ENST00000474643 WISP1O95388 367 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 POLBP06746 335 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 NELFEP18615 380 aaKnown RBP14.76□□□□□ -0.05
VARS-223ENST00000474643 TPSB2P20231 275 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 CDK16Q00536 496 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 TPSAB1Q15661 275 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 WHAMMP3Q1A5X7 153 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 TMTC4Q5T4D3 741 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 FAM83HQ6ZRV2 1179 aaPredicted RBP14.76□□□□□ -0.05
VARS-223ENST00000474643 NLRP9Q7RTR0 991 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 CFAP206Q8IYR0 622 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 HEXDCQ8WVB3 486 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.76□□□□□ -0.05
VARS-223ENST00000474643 CDKN2AIPNLQ96HQ2 116 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 C19orf43Q9BQ61 176 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 EPHA6Q9UF33 1036 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 ASIC3Q9UHC3 531 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 IL17BQ9UHF5 180 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 TUBD1Q9UJT1 453 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 CROTQ9UKG9 612 aa14.76□□□□□ -0.05
VARS-223ENST00000474643 SPTA1P02549 2419 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.75□□□□□ -0.05
VARS-223ENST00000474643 TLCD2A6NGC4 264 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 MROH6A6NGR9 719 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 SPAG6O75602 509 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 ZNF28P17035 718 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 NDUFS1P28331 727 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 NPY2RP49146 381 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 PRAMEP78395 509 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 XIAPP98170 497 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 CACNG1Q06432 222 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 CKAP4Q07065 602 aaKnown RBP14.75□□□□□ -0.05
VARS-223ENST00000474643 KCNAB1Q14722 419 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 GPR33Q49SQ1 333 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 PCID2Q5JVF3 399 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 TSTD2Q5T7W7 516 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 METRNLQ641Q3 311 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 CASC4Q6P4E1 433 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 HOOK3Q86VS8 718 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 OR6P1Q8NGX9 317 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 OR2L2Q8NH16 312 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 KLHL6Q8WZ60 621 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 RANBP9Q96S59 729 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 CD180Q99467 661 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 CCM2Q9BSQ5 444 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 SLC7A5P2Q9GIP4 190 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 IL22Q9GZX6 179 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 RAB33BQ9H082 229 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 PADI1Q9ULC6 663 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 TCAF1Q9Y4C2 921 aa14.75□□□□□ -0.05
VARS-223ENST00000474643 MRPS18BQ9Y676 258 aaKnown RBP14.75□□□□□ -0.05
VARS-223ENST00000474643 PIKFYVEQ9Y2I7 2098 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 TCRBV7S3A2A0A539 114 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 PIPSLA2A3N6 862 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 GSAPA4D1B5 854 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 OR6C74A6NCV1 312 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 OR5K3A6NET4 321 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 PRR19A6NJB7 356 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 GOLGA8MH3BSY2 632 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 CCDC188H7C350 402 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 FGF5P12034 268 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 ITGB6P18564 788 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 MGAT1P26572 445 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 OAS2P29728 719 aaKnown RBP14.74□□□□□ -0.05
VARS-223ENST00000474643 CSRP3P50461 194 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 CRADDP78560 199 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 HSD11B2P80365 405 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 ERV3-1Q14264 604 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.74□□□□□ -0.05
VARS-223ENST00000474643 BCL7AQ4VC05 210 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 DUS1LQ6P1R4 473 aaKnown RBP14.74□□□□□ -0.05
VARS-223ENST00000474643 LRRC8BQ6P9F7 803 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 AFTPHQ6ULP2 937 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 KMT5CQ86Y97 462 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 TMEM126BQ8IUX1 230 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 NXPE1Q8N323 547 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 HM13Q8TCT9 377 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 NAT14Q8WUY8 206 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 HDAC10Q969S8 669 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 TTC1Q99614 292 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 MAP3K3Q99759 626 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 TWSG1Q9GZX9 223 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 ZNF71Q9NQZ8 489 aaPredicted RBP14.74□□□□□ -0.05
VARS-223ENST00000474643 FGF21Q9NSA1 209 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 SAMD15Q9P1V8 674 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 ANAPC5Q9UJX4 755 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 POLHQ9Y253 713 aa14.74□□□□□ -0.05
VARS-223ENST00000474643 TENM4Q6N022 2769 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 IGHV5-51A0A0C4DH38 117 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 CDC14CA4D256 554 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 MKRN2OSH3BPM6 223 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 H7C0S8 307 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 SUV39H1O43463 412 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms