RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 FDFT1P37268 417 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 SKIDA1Q1XH10 827 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 DEFB109BQ30KR1 87 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 C16orf46Q6P387 395 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 PACS1Q6VY07 963 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 ZNF662Q6ZS27 426 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 BPHLQ86WA6 291 aaPredicted RBP18.04■□□□□ 0.48
COL7A1-209ENST00000474432 SLC38A9Q8NBW4 561 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 OR52E1Q8NGJ3 308 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 UBE2Q2Q8WVN8 375 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 HDAC10Q969S8 669 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 RANBP9Q96S59 729 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 RIMKLBQ9ULI2 386 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 ZNF148Q9UQR1 794 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 SLC5A10A0PJK1 596 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 SLC9B1P1A6NJY1 282 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 BHMG1C9JSJ3 638 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-209ENST00000474432 ARHGAP6O43182 974 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 OR1I1O60431 355 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 SNRNP200O75643 2136 aaKnown RBP18.03■□□□□ 0.48
COL7A1-209ENST00000474432 IFNB1P01574 187 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 PRDX3P30048 256 aaKnown RBP18.03■□□□□ 0.48
COL7A1-209ENST00000474432 RPL22P35268 128 aaKnown RBP18.03■□□□□ 0.48
COL7A1-209ENST00000474432 NSG1P42857 185 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 GSDMDP57764 484 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 TUBB4BP68371 445 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 MC1RQ01726 317 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 DNASE1L3Q13609 305 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 TUBB2AQ13885 445 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 SEMA3AQ14563 771 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 ZNF789Q5FWF6 425 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 TSTD2Q5T7W7 516 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 PRAMEF17Q5VTA0 474 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 FAM199XQ6PEV8 388 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-209ENST00000474432 NAPRTQ6XQN6 538 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 ZNF517Q6ZMY9 492 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-209ENST00000474432 PRICKLE2Q7Z3G6 844 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 TMEM135Q86UB9 458 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 ADGRF3Q8IZF5 1079 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 LCN9Q8WX39 176 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 TFGQ92734 400 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-209ENST00000474432 TUBB2BQ9BVA1 445 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 PITPNM3Q9BZ71 974 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 FAM117AQ9C073 453 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 SRMSQ9H3Y6 488 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 XKR8Q9H6D3 395 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 MVB12BQ9H7P6 319 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 RAB6BQ9NRW1 208 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 C1GALT1Q9NS00 363 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 KCNMB2Q9Y691 235 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 SEC16AO15027 2179 aa18.03■□□□□ 0.48
COL7A1-209ENST00000474432 HEATR9A2RTY3 570 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 GOT2P00505 430 aaKnown RBP18.02■□□□□ 0.48
COL7A1-209ENST00000474432 MT-ND3P03897 115 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 GSTM1P09488 218 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 ST6GAL1P15907 406 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 ADRA1DP25100 572 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 GSTM4Q03013 218 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 PRKG2Q13237 762 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 KRT33BQ14525 404 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 RPS6KA1Q15418 735 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 ARMC6Q6NXE6 501 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 CYB5D1Q6P9G0 228 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 DNAAF3Q8N9W5 541 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 APOBEC4Q8WW27 367 aaKnown RBP18.02■□□□□ 0.48
COL7A1-209ENST00000474432 TLR10Q9BXR5 811 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 VPS37BQ9H9H4 285 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 LATS2Q9NRM7 1088 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 KCND1Q9NSA2 647 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 ICKQ9UPZ9 632 aa18.02■□□□□ 0.48
COL7A1-209ENST00000474432 UBR5O95071 2799 aaPredicted RBP18.02■□□□□ 0.47
COL7A1-209ENST00000474432 IFRD1O00458 451 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-209ENST00000474432 LIN7AO14910 233 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-209ENST00000474432 KATNA1O75449 491 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 CREG1O75629 220 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 RECKO95980 971 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 CCNYL3P0C7X3 344 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 ARL4DP49703 201 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 ABRQ12979 859 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 GPS2Q13227 327 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 ERV3-1Q14264 604 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 CCNG2Q16589 344 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 KCTD19Q17RG1 926 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-209ENST00000474432 LCN10Q6JVE6 187 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 DRICH1Q6PGQ1 229 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-209ENST00000474432 OR5AR1Q8NGP9 310 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 FLVCR1-AS1Q8TAF5 88 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 SGSM3Q96HU1 749 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 HGH1Q9BTY7 390 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 TRIM4Q9C037 500 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 KCND3Q9UK17 655 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 TCAF1Q9Y4C2 921 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 FER1L5A0AVI2 2057 aa18.01■□□□□ 0.47
COL7A1-209ENST00000474432 C21orf140B9A014 251 aa18■□□□□ 0.47
COL7A1-209ENST00000474432 MATN2O00339 956 aa18■□□□□ 0.47
COL7A1-209ENST00000474432 SCRG1O75711 98 aa18■□□□□ 0.47
COL7A1-209ENST00000474432 WISP1O95388 367 aa18■□□□□ 0.47
COL7A1-209ENST00000474432 PVRP15151 417 aa18■□□□□ 0.47
COL7A1-209ENST00000474432 CDH3P22223 829 aa18■□□□□ 0.47
COL7A1-209ENST00000474432 PRKAA1Q13131 559 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms