RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SCRG1O75711 98 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 NTRK1P04629 796 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 PSMA3P25788 255 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 NSG1P42857 185 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 ARCN1P48444 511 aaKnown RBP19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 RPS15P62841 145 aaKnown RBP19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 ZNF658BQ4V348 819 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 LACTB2Q53H82 288 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 SEL1L2Q5TEA6 688 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 CERS6Q6ZMG9 384 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 GAS2L3Q86XJ1 694 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 CLDN19Q8N6F1 224 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 DNAAF3Q8N9W5 541 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 ZNF501Q96CX3 271 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 ABHD17AQ96GS6 310 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 SMARCAL1Q9NZC9 954 aa19.79■□□□□ 0.76
PDLIM4-206ENST00000474421 TCRBV7S2A1N4TA0A589 114 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 CDC14CA4D256 554 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 MKRN2OSH3BPM6 223 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 LIN7AO14910 233 aaPredicted RBP19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 FTH1P02794 183 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 KLK3P07288 261 aaPredicted RBP19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 MSNP26038 577 aaKnown RBP19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 FDFT1P37268 417 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 GSDMDP57764 484 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 TLE1Q04724 770 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 CDH17Q12864 832 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 GPR19Q15760 415 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 DBN1Q16643 649 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 LYPLAL1Q5VWZ2 237 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 PACS1Q6VY07 963 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 PIANPQ8IYJ0 282 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 CPT1BQ92523 772 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 TFGQ92734 400 aaPredicted RBP19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 LRFN5Q96NI6 719 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 TTC1Q99614 292 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 ACTL8Q9H568 366 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 ZNF71Q9NQZ8 489 aaPredicted RBP19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 CAPN6Q9Y6Q1 641 aa19.78■□□□□ 0.76
PDLIM4-206ENST00000474421 HEATR9A2RTY3 570 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 SLC9B1P1A6NJY1 282 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 MSL3P1P0C860 447 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 PTPN4P29074 926 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 PRDX3P30048 256 aaKnown RBP19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 CASRP41180 1078 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 LMAN1P49257 510 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 PLOD1Q02809 727 aaPredicted RBP19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 BOP1Q14137 746 aaKnown RBP19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 AMIGO1Q86WK6 493 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 TAB3Q8N5C8 712 aaPredicted RBP19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 SPC24Q8NBT2 197 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 OR52E1Q8NGJ3 308 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 THAP4Q8WY91 577 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 PIH1D1Q9NWS0 290 aaKnown RBP19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 RIMKLBQ9ULI2 386 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 MAN2B2Q9Y2E5 1009 aa19.77■□□□□ 0.76
PDLIM4-206ENST00000474421 SPTBP11277 2137 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 A0A0U1RQJ8 604 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 C2orf74A8MZ97 194 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 E7EVH7 732 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 LIASO43766 372 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 KRT86O43790 486 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 RFPL1O75677 317 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 SUN1O94901 812 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 FURINP09958 794 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 PRSS56P0CW18 603 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 PDHA2P29803 388 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 PREPP48147 710 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 PMS2P54278 862 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 OASLQ15646 514 aaKnown RBP19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 PPP1R21Q6ZMI0 780 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 NLRP9Q7RTR0 991 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 SYVN1Q86TM6 617 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 PHC3Q8NDX5 983 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 OR52K1Q8NGK4 314 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 ATG4AQ8WYN0 398 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 MR1Q95460 341 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 TLR10Q9BXR5 811 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 PITPNM3Q9BZ71 974 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 ZNF148Q9UQR1 794 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 SEC16AO15027 2179 aa19.76■□□□□ 0.75
PDLIM4-206ENST00000474421 UBR5O95071 2799 aaPredicted RBP19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 CCDC162PA2VCL2 907 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 BTN3A3O00478 584 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 BTN3A1O00481 513 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 IFNB1P01574 187 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 OR56A5P0C7T3 313 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 UGT8Q16880 541 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 IZUMO3Q5VZ72 239 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 TCTN3Q6NUS6 607 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 FBXO38Q6PIJ6 1188 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 AFTPHQ6ULP2 937 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 ZNF517Q6ZMY9 492 aaPredicted RBP19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 HOOK3Q86VS8 718 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 SLC13A5Q86YT5 568 aaPredicted RBP19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 APLFQ8IW19 511 aaPredicted RBP19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 ELMO1Q92556 727 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 PPM1MQ96MI6 270 aa19.75■□□□□ 0.75
PDLIM4-206ENST00000474421 RANBP9Q96S59 729 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms