RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PCNX1Q96RV3 2341 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 FBN3Q75N90 2809 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 PCM1Q15154 2024 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 OR2AG2A6NM03 316 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PRSS44E7EML9 344 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 E7EQ34 232 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 H3BMH7 237 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 MATN2O00339 956 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 GAPDHSO14556 408 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF749O43361 778 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 LDB2O43679 373 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 UGT1A9O60656 530 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 KLHL41O60662 606 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 CNOT3O75175 753 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 FAM155BO75949 473 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 IPO13O94829 963 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 NDST3O95803 873 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 MT-CYBP00156 380 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 IGHEP01854 428 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 STSP08842 583 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 EDN3P14138 238 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ST6GAL1P15907 406 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 UGT1A6P19224 532 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 CDH3P22223 829 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 UGT1A1P22309 533 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 UGT1A4P22310 534 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ITGA3P26006 1051 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PTGER4P35408 488 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 HMGCLP35914 325 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 GJC1P36383 396 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PREPP48147 710 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 LMAN1P49257 510 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 FOXL2P58012 376 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ADCY2Q08462 1091 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 KLHL30Q0D2K2 578 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PRKAA1Q13131 559 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 SSPNQ14714 243 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 NOMO1Q15155 1222 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC14A2Q15849 920 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PCSK7Q16549 785 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 HIF1AQ16665 826 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 LDLRAP1Q5SW96 308 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 FNBP1LQ5T0N5 605 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 GPRC6AQ5T6X5 926 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 HGSNATQ68CP4 663 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 SP5Q6BEB4 398 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ARMC6Q6NXE6 501 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM220Q6QAJ8 160 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 FAM151BQ6UXP7 276 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 RBM43Q6ZSC3 357 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 CDHR3Q6ZTQ4 885 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 VASH1Q7L8A9 365 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 GDF7Q7Z4P5 450 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PPP1R32Q7Z5V6 425 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 NT5DC3Q86UY8 548 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM151BQ8IW70 566 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 LINC00528Q8N1L1 170 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ZADH2Q8N4Q0 377 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 BEND7Q8N7W2 519 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 KCTD6Q8NC69 237 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 OR2Y1Q8NGV0 311 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 SPATA22Q8NHS9 363 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 DTX3LQ8TDB6 740 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 GRHL3Q8TE85 626 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PPP4R1Q8TF05 950 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ZFPM2Q8WW38 1151 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 RMDN2Q96LZ7 410 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 TTC25Q96NG3 672 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 AGAP3Q96P47 875 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 TRAPPC9Q96Q05 1148 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 SRPK1Q96SB4 655 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 WDR77Q9BQA1 342 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 C17orf62Q9BQA9 187 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PITPNM3Q9BZ71 974 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 XPO4Q9C0E2 1151 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 WWP1Q9H0M0 922 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 THAP2Q9H0W7 228 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC25A51Q9H1U9 297 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 TRABDQ9H4I3 376 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 UGT1A7Q9HAW7 530 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 UGT1A10Q9HAW8 530 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 UGT1A8Q9HAW9 530 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 CBX8Q9HC52 389 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 SMOXQ9NWM0 555 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 P4HTMQ9NXG6 502 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 PTRH2Q9Y3E5 179 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 DNMT3AQ9Y6K1 912 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 ABCA2Q9BZC7 2435 aa4.97□□□□□ -1.61
SNRNP40-204ENST00000474025 MED13LQ71F56 2210 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 GLYATL1P3A0A0U1RQE8 302 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 A0A1B0GUH1 482 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 A0A1W2PQJ5 194 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 GSAPA4D1B5 854 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 MGAT4DA6NG13 374 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 MYO1FO00160 1098 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 BTN3A1O00481 513 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 PEX12O00623 359 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SGTAO43765 313 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 MAN1A2O60476 641 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms