RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PGLSO95336 258 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 PNPP00491 289 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 PTMAP06454 111 aaKnown RBP4.09□□□□□ -1.75
BRCA1-212ENST00000473961 FAM58BPP0C7Q3 252 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 PSG1P11464 419 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 SLC6A6P31641 620 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 HSD17B3P37058 310 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 COG7P83436 770 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF234Q14588 700 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 FAM174BQ3ZCQ3 159 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 KLHL26Q53HC5 615 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 CASC4Q6P4E1 433 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 KLC3Q6P597 504 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 ZSCAN30Q86W11 494 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 SRRM1Q8IYB3 904 aaKnown RBP4.09□□□□□ -1.75
BRCA1-212ENST00000473961 SYCP3Q8IZU3 236 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 OR5R1Q8NH85 324 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 GRAPLQ8TC17 118 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-212ENST00000473961 MGARPQ8TDB4 240 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 TMEM255BQ8WV15 326 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 SLC44A1Q8WWI5 657 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 TEKT1Q969V4 418 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 EXOC4Q96A65 974 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 PHF21AQ96BD5 680 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 HMCESQ96FZ2 354 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 FAM84BQ96KN1 310 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF582Q96NG8 517 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-212ENST00000473961 C16orf70Q9BSU1 422 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 KATNB1Q9BVA0 655 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 NOX4Q9NPH5 578 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 MIOSQ9NXC5 875 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 SMARCAL1Q9NZC9 954 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 CACNG4Q9UBN1 327 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 SIX4Q9UIU6 781 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 MTUS1Q9ULD2 1270 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 PADI3Q9ULW8 664 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 VDAC3Q9Y277 283 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 INSL5Q9Y5Q6 135 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 ZCCHC6Q5VYS8 1495 aaKnown RBP4.09□□□□□ -1.75
BRCA1-212ENST00000473961 PRSS51A0A1B0GVH4 220 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 A0A1W2PPQ1 181 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 A4D1N5 150 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 LILRA5A6NI73 299 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 YDJCA8MPS7 323 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 HEPACAM2A8MVW5 462 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PTGESO14684 152 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 TOMM70O94826 608 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 DDNO94850 711 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 C9P02748 559 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 RLN1P04808 185 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PLA2G4BP0C869 781 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 FAM106CPP0CH98 169 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 GNAZP19086 355 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 TNFRSF1BP20333 461 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 S1PR1P21453 382 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 SCP2P22307 547 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PTPN3P26045 913 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PSMC4P43686 418 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 RFX5P48382 616 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 LHX1P48742 406 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 SEC61A1P61619 476 aaKnown RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 ARF5P84085 180 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 EEF1A2Q05639 463 aaKnown RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 COASYQ13057 564 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PPP2R5CQ13362 524 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 CUL3Q13618 768 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 DHX34Q14147 1143 aaKnown RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 RCN2Q14257 317 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 ZNF789Q5FWF6 425 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 TCTE1Q5JU00 501 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PAPPA-AS1Q5QFB9 102 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 MEPCEQ7L2J0 689 aaKnown RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PRAG1Q86YV5 1406 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 CLYBLQ8N0X4 340 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 HMGCLL1Q8TB92 370 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 SYN2Q92777 582 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 TANKQ92844 425 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PTP4A1Q93096 173 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 MIB2Q96AX9 1013 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 CDCA5Q96FF9 252 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 OTUB1Q96FW1 271 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 ZNF385AQ96PM9 386 aaKnown RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PARK7Q99497 189 aaKnown RBP4.08□□□□□ -1.76
BRCA1-212ENST00000473961 CPNE1Q99829 537 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 BTBD10Q9BSF8 475 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 FZD8Q9H461 694 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 TUFT1Q9NNX1 390 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 TCP11L1Q9NUJ3 509 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 ZNF224Q9NZL3 707 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 RHCGQ9UBD6 479 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 KCNK7Q9Y2U2 307 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 PCDHAC2Q9Y5I4 1007 aa4.08□□□□□ -1.76
BRCA1-212ENST00000473961 NEMP2A6NFY4 417 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 TMEM178BH3BS89 294 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 ZNHIT1O43257 154 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 CBLP22681 906 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 CORO1AP31146 461 aaKnown RBP4.07□□□□□ -1.76
BRCA1-212ENST00000473961 IL15P40933 162 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms