RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 TBC1D21Q8IYX1 336 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 PPM1NQ8N819 430 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 GPATCH11Q8N954 259 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 SPDYE1Q8NFV5 336 aaPredicted RBP19.5■□□□□ 0.71
SF1-213ENST00000472725 CD200R1Q8TD46 325 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 FOPNLQ96NB1 174 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 NDNQ99608 321 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 GPR21Q99679 349 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 ABCG4Q9H172 646 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 KIR3DX1Q9H7L2 352 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 POPDC3Q9HBV1 291 aa19.5■□□□□ 0.71
SF1-213ENST00000472725 CNOT1A5YKK6 2376 aaKnown RBP19.5■□□□□ 0.71
SF1-213ENST00000472725 FAM95CA0A1B0GW59 222 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 RIPK2O43353 540 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 OPA1O60313 960 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 RGS4P49798 205 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 LIMK2P53671 638 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 KRT33BQ14525 404 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 RBM20Q5T481 1227 aaKnown RBP19.49■□□□□ 0.71
SF1-213ENST00000472725 EMBQ6PCB8 327 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 ACVR1CQ8NER5 493 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 OR5K2Q8NHB8 316 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 TSPAN17Q96FV3 270 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 GPR22Q99680 433 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 TRIT1Q9H3H1 467 aaKnown RBP19.49■□□□□ 0.71
SF1-213ENST00000472725 LRRN3Q9H3W5 708 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 KCNK4Q9NYG8 393 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 FETUBQ9UGM5 382 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 RAB21Q9UL25 225 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 ASF1AQ9Y294 204 aa19.49■□□□□ 0.71
SF1-213ENST00000472725 FAM221BA6H8Z2 402 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 NTN3O00634 580 aaPredicted RBP19.48■□□□□ 0.71
SF1-213ENST00000472725 MATN4O95460 622 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 MPC1LP0DKB6 136 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 CCNFP41002 786 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 TIAL1Q01085 375 aaKnown RBP eCLIP19.48■□□□□ 0.71
SF1-213ENST00000472725 PDAP1Q13442 181 aaKnown RBP19.48■□□□□ 0.71
SF1-213ENST00000472725 KLHL35Q6PF15 583 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 NAPRTQ6XQN6 538 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 VRK3Q8IV63 474 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 GALNT15Q8N3T1 639 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 SIDT2Q8NBJ9 832 aaKnown RBP19.48■□□□□ 0.71
SF1-213ENST00000472725 OR10G6Q8NH81 332 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 MAGEC3Q8TD91 643 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 GRAMD1AQ96CP6 724 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 ELMO2Q96JJ3 720 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 FERD3LQ96RJ6 166 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 GALPQ9UBC7 116 aa19.48■□□□□ 0.71
SF1-213ENST00000472725 IGHV1OR21-1A0A087WYE8 117 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 B4GAT1O43505 415 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 F7P08709 466 aaPredicted RBP19.47■□□□□ 0.71
SF1-213ENST00000472725 ALDH4A1P30038 563 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 SERPINB9P50453 376 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 SLC12A2P55011 1212 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 CDKN2DP55273 166 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 GPR18Q14330 331 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 ACSBG2Q5FVE4 666 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 TTC23LQ6PF05 361 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 CCDC91Q7Z6B0 441 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 TMPRSS12Q86WS5 348 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 GSPT2Q8IYD1 628 aaKnown RBP19.47■□□□□ 0.71
SF1-213ENST00000472725 GIMAP7Q8NHV1 300 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 SLC44A1Q8WWI5 657 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 PDLIM5Q96HC4 596 aaKnown RBP19.47■□□□□ 0.71
SF1-213ENST00000472725 PARD6BQ9BYG5 372 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 TFB2MQ9H5Q4 396 aaKnown RBP19.47■□□□□ 0.71
SF1-213ENST00000472725 SYTL2Q9HCH5 934 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.47■□□□□ 0.71
SF1-213ENST00000472725 SLC24A2Q9UI40 661 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 ZNF180Q9UJW8 692 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 CFAP20Q9Y6A4 193 aaKnown RBP19.47■□□□□ 0.71
SF1-213ENST00000472725 IKBKGQ9Y6K9 419 aa19.47■□□□□ 0.71
SF1-213ENST00000472725 V9GYY5 206 aaPredicted RBP19.47■□□□□ 0.71
SF1-213ENST00000472725 DUX1O43812 170 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 PIAS1O75925 651 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 CPNE6O95741 557 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 CNTFP26441 200 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 ABCG1P45844 678 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 IL2P60568 153 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 CCL7P80098 99 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 INSM1Q01101 510 aaPredicted RBP19.46■□□□□ 0.71
SF1-213ENST00000472725 SPIDRQ14159 915 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 CDCP2Q5VXM1 449 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 TAOK1Q7L7X3 1001 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 RAB44Q7Z6P3 723 aaPredicted RBP19.46■□□□□ 0.71
SF1-213ENST00000472725 DCUN1D3Q8IWE4 304 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 ANKRD7Q92527 254 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 FAM136AQ96C01 138 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 ATXN7L3BQ96GX2 97 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 AHCYL2Q96HN2 611 aaKnown RBP19.46■□□□□ 0.71
SF1-213ENST00000472725 GFM1Q96RP9 751 aaKnown RBP19.46■□□□□ 0.71
SF1-213ENST00000472725 SLC30A3Q99726 388 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 CCDC77Q9BR77 488 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 RAB33BQ9H082 229 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 PPCSQ9HAB8 311 aa19.46■□□□□ 0.71
SF1-213ENST00000472725 A0A1W2PQM1 296 aa19.45■□□□□ 0.7
SF1-213ENST00000472725 TMX2-CTNND1H3BSU7 103 aa19.45■□□□□ 0.7
SF1-213ENST00000472725 RPLP0P05388 317 aaKnown RBP19.45■□□□□ 0.7
SF1-213ENST00000472725 INHBAP08476 426 aa19.45■□□□□ 0.7
SF1-213ENST00000472725 ITGA2BP08514 1039 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms