RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MSNP26038 577 aaKnown RBP15.84■□□□□ 0.13
COL9A3-208ENST00000469802 STIP1P31948 543 aaKnown RBP15.84■□□□□ 0.13
COL9A3-208ENST00000469802 NSG1P42857 185 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 PREPP48147 710 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 ARL4DP49703 201 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 CSRP3P50461 194 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 ACVR1Q04771 509 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 CDH17Q12864 832 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 SEL1L2Q5TEA6 688 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 ARMC6Q6NXE6 501 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 FBXO38Q6PIJ6 1188 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 TAS2R42Q7RTR8 314 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 SLC13A5Q86YT5 568 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-208ENST00000469802 OR52E1Q8NGJ3 308 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 OR52K1Q8NGK4 314 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 LCN9Q8WX39 176 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 TSGA10Q9BZW7 698 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 SRMSQ9H3Y6 488 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 AKIRIN1Q9H9L7 192 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-208ENST00000469802 RIMKLBQ9ULI2 386 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 PCDHB3Q9Y5E6 796 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 PRSS21Q9Y6M0 314 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 CCDC78A2IDD5 438 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 CCDC162PA2VCL2 907 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 OR51F1A6NGY5 319 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 QSOX1O00391 747 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 BTN3A3O00478 584 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 LIN7AO14910 233 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-208ENST00000469802 SCRG1O75711 98 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 NTRK1P04629 796 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 FDFT1P37268 417 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 PRKAA1Q13131 559 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 SEMA5AQ13591 1074 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 ERV3-1Q14264 604 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 KRT33BQ14525 404 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 SKIDA1Q1XH10 827 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 CCDC38Q502W7 563 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 ZNF789Q5FWF6 425 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 ABHD17AQ96GS6 310 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 LRFN5Q96NI6 719 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 FERD3LQ96RJ6 166 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 RANBP9Q96S59 729 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 RUFY1Q96T51 708 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 NRTNQ99748 197 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 TWSG1Q9GZX9 223 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 ACTL8Q9H568 366 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 ETNK1Q9HBU6 452 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 KCND1Q9NSA2 647 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 SOHLH2Q9NX45 425 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 POLHQ9Y253 713 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 MED13Q9UHV7 2174 aa15.83■□□□□ 0.12
COL9A3-208ENST00000469802 TNRC6AQ8NDV7 1962 aaKnown RBP15.82■□□□□ 0.12
COL9A3-208ENST00000469802 SEC16AO15027 2179 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 HEATR9A2RTY3 570 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 SLC9B1P1A6NJY1 282 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 KATNA1O75449 491 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 CDH3P22223 829 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 ACADLP28330 430 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 PRDX3P30048 256 aaKnown RBP15.82■□□□□ 0.12
COL9A3-208ENST00000469802 GRIA1P42261 906 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 PMS2P54278 862 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 KCNC4Q03721 635 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 ABRQ12979 859 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 GPS2Q13227 327 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 SIX1Q15475 284 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-208ENST00000469802 TMTC4Q5T4D3 741 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 TMEM135Q86UB9 458 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 PTRH1Q86Y79 214 aaKnown RBP15.82■□□□□ 0.12
COL9A3-208ENST00000469802 TMEM126BQ8IUX1 230 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 ADGRF3Q8IZF5 1079 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 SLC38A9Q8NBW4 561 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 TFGQ92734 400 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-208ENST00000469802 HGH1Q9BTY7 390 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 TLR10Q9BXR5 811 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 GPR87Q9BY21 358 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 SMARCAL1Q9NZC9 954 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 GUCA1BQ9UMX6 200 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 ICKQ9UPZ9 632 aa15.82■□□□□ 0.12
COL9A3-208ENST00000469802 SLC5A10A0PJK1 596 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 GSAPA4D1B5 854 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 KRT86O43790 486 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 FTH1P02794 183 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 ST6GAL1P15907 406 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 PTPN4P29074 926 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 RORAP35398 523 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 TLE1Q04724 770 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 FLNCQ14315 2725 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 TSTD2Q5T7W7 516 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 MEI1Q5TIA1 1274 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 NUP210LQ5VU65 1888 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 ZNF449Q6P9G9 518 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 FAM199XQ6PEV8 388 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-208ENST00000469802 AFTPHQ6ULP2 937 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 ZNF534Q76KX8 674 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 AMIGO1Q86WK6 493 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 DNAAF3Q8N9W5 541 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 GLIS1Q8NBF1 620 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 PHC3Q8NDX5 983 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 C1orf54Q8WWF1 131 aa15.81■□□□□ 0.12
COL9A3-208ENST00000469802 SEC14L1Q92503 715 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms