RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 UNC5BQ8IZJ1 945 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ASCL3Q9NQ33 180 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 PCMTD2Q9NV79 361 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ZNHIT2Q9UHR6 403 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 APPL1Q9UKG1 709 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 SPO11Q9Y5K1 396 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 AURKAO14965 403 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 NDST3O95803 873 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 BPGMP07738 259 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ERVK-10P10266 1014 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 NEFHP12036 1026 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 LIMK2P53671 638 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ZNF648Q5T619 568 aaPredicted RBP17.31■□□□□ 0.36
MRPL28-208ENST00000469744 LRRC69Q6ZNQ3 347 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 NAGSQ8N159 534 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 FITM2Q8N6M3 262 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 GPR26Q8NDV2 337 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 PRR11Q96HE9 360 aaPredicted RBP17.31■□□□□ 0.36
MRPL28-208ENST00000469744 RMDN2Q96LZ7 410 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 C7orf26Q96N11 449 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 SPATA16Q9BXB7 569 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 TRIM55Q9BYV6 548 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 GPR63Q9BZJ6 419 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 C12orf65Q9H3J6 166 aaKnown RBP17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ARNT2Q9HBZ2 717 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 MAGEE1Q9HCI5 957 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 PIH1D1Q9NWS0 290 aaKnown RBP17.31■□□□□ 0.36
MRPL28-208ENST00000469744 RRP8O43159 456 aaKnown RBP17.3■□□□□ 0.36
MRPL28-208ENST00000469744 NUDT21O43809 227 aaKnown RBP17.3■□□□□ 0.36
MRPL28-208ENST00000469744 DNAJC6O75061 913 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 DXOO77932 396 aaKnown RBP17.3■□□□□ 0.36
MRPL28-208ENST00000469744 ALDOAP04075 364 aaKnown RBP17.3■□□□□ 0.36
MRPL28-208ENST00000469744 CHRNA4P43681 627 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 SERPINB8P50452 374 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 WNT3AP56704 352 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 OR1D5P58170 312 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 PDE1BQ01064 536 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 OLIG2Q13516 323 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 AMZ1Q400G9 498 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 DENND5AQ6IQ26 1287 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 KDELC1Q6UW63 502 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 RANBP10Q6VN20 620 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 TMPRSS9Q7Z410 1059 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 KCNMB4Q86W47 210 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 C17orf82Q86X59 251 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-208ENST00000469744 ARL14Q8N4G2 192 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 SLC25A41Q8N5S1 370 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 ZNF578Q96N58 590 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-208ENST00000469744 MCMBPQ9BTE3 642 aa17.3■□□□□ 0.36
MRPL28-208ENST00000469744 TRBV23OR9-2A0A075B6M9 112 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 CCDC187A0A096LP49 1063 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 RHPN2P1A8MT19 583 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 B4GAT1O43505 415 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 EML2O95834 649 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 HGFP14210 728 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 BGNP21810 368 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 RBMS1P29558 406 aaKnown RBP17.29■□□□□ 0.36
MRPL28-208ENST00000469744 ALDH4A1P30038 563 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 INHBCP55103 352 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 PCBP4P57723 403 aaKnown RBP17.29■□□□□ 0.36
MRPL28-208ENST00000469744 SLC14A2Q15849 920 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 CES3Q6UWW8 571 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 CHST15Q7LFX5 561 aaPredicted RBP17.29■□□□□ 0.36
MRPL28-208ENST00000469744 STRA8Q7Z7C7 330 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 LCA5Q86VQ0 697 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 NUDCD3Q8IVD9 361 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 CNTN4Q8IWV2 1026 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 RAVER1Q8IY67 606 aaKnown RBP17.29■□□□□ 0.36
MRPL28-208ENST00000469744 LSMEM2Q8N112 164 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 PPHLN1Q8NEY8 458 aaKnown RBP17.29■□□□□ 0.36
MRPL28-208ENST00000469744 IPMKQ8NFU5 416 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 WDR36Q8NI36 951 aaKnown RBP17.29■□□□□ 0.36
MRPL28-208ENST00000469744 SLC46A1Q96NT5 459 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 LRRC37BQ96QE4 947 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 RANBP9Q96S59 729 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 FICDQ9BVA6 458 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 RDH14Q9HBH5 336 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 BPIFA1Q9NP55 256 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 KCNK6Q9Y257 313 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 MTO1Q9Y2Z2 717 aaKnown RBP17.29■□□□□ 0.36
MRPL28-208ENST00000469744 PSAT1Q9Y617 370 aa17.29■□□□□ 0.36
MRPL28-208ENST00000469744 MGAQ8IWI9 3026 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 RGSL1A5PLK6 1076 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 RASSF9O75901 435 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 TNFSF15O95150 251 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 ACP5P13686 325 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 HOXB3P14651 431 aaPredicted RBP17.28■□□□□ 0.36
MRPL28-208ENST00000469744 PNLIPP16233 465 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 BPIP17213 487 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 TYK2P29597 1187 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 B4GALNT1Q00973 533 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 SF3A3Q12874 501 aaKnown RBP eCLIP17.28■□□□□ 0.36
MRPL28-208ENST00000469744 BIRC2Q13490 618 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 CCDC153Q494R4 210 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 SIRPB2Q5JXA9 342 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 CCDC91Q7Z6B0 441 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 ZNF761Q86XN6 746 aaPredicted RBP17.28■□□□□ 0.36
MRPL28-208ENST00000469744 SPACA3Q8IXA5 215 aa17.28■□□□□ 0.36
MRPL28-208ENST00000469744 MFSD3Q96ES6 412 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms