RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SCNN1GP51170 649 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SLC6A3Q01959 620 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CDH17Q12864 832 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MAB21L1Q13394 359 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 KCNC3Q14003 757 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SETMARQ53H47 684 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PAGE3Q5JUK9 113 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 LAMTOR1Q6IAA8 161 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SHQ1Q6PI26 577 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 LRRC8DQ7L1W4 858 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 GPAT4Q86UL3 456 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HERVK_113Q902F9 699 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CENPIQ92674 756 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PDXPQ96GD0 296 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 GPR137Q96N19 417 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TMEM74Q96NL1 305 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 OPALINQ96PE5 141 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 ACOX2Q99424 681 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MAP3K20Q9NYL2 800 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TAS2R7Q9NYW3 318 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HSPB11Q9Y547 144 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 DNAJC15Q9Y5T4 150 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 KLF2Q9Y5W3 355 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MICAL3Q7RTP6 2002 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 A0A0G2JMZ2 1700 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 LRRC37A2A6NM11 1700 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 LTBP4Q8N2S1 1624 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 A0A1B0GVM2 712 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 AZIN1O14977 448 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PIP5K1BO14986 540 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 ANKRD28O15084 1053 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MUSKO15146 869 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CD3EAPO15446 510 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PROM1O43490 865 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SGTAO43765 313 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF254O75437 659 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 ERN1O75460 977 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 NPM3O75607 178 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 B3GALNT1O75752 331 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CYBBP04839 570 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HMGN1P05114 100 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 F7P08709 466 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PRR35P0CG20 571 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 DDCP20711 480 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 KCNA5P22460 613 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 F8A1P23610 371 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PTX3P26022 381 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 NMBRP28336 390 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TNFSF8P32971 234 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HTR7P34969 479 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SCNN1AP37088 669 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 ZFP36L2P47974 494 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 POLR2JP52435 117 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PER3P56645 1201 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TAS2R39P59534 338 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HERVK_113P63132 956 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CSHL1Q14406 222 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 GRB7Q14451 532 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 NFE2L1Q14494 772 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PAFAH1B3Q15102 231 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SLC14A2Q15849 920 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SYT16Q17RD7 645 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SLC35F1Q5T1Q4 408 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CERCAMQ5T4B2 595 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MLIPQ5VWP3 458 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 NAPEPLDQ6IQ20 393 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 LCLAT1Q6UWP7 414 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TLK2Q86UE8 772 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CCDC117Q8IWD4 279 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PM20D2Q8IYS1 436 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 OR8H1Q8NGG4 311 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 IL31RAQ8NI17 732 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 FRS2Q8WU20 508 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 DACT3Q96B18 629 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TUBGCP3Q96CW5 907 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MSANTD3Q96H12 275 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 RAD9AQ99638 391 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PITX2Q99697 317 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 C11orf84Q9BUA3 381 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 ERVK-6Q9BXR3 956 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HDHD5Q9BXW7 423 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TRIM8Q9BZR9 551 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SRRQ9GZT4 340 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 OR51B5Q9H339 312 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 OLA1Q9NTK5 396 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PLCXD1Q9NUJ7 323 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SETD4Q9NVD3 440 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PTTG3PQ9NZH4 202 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 FBXO40Q9UH90 709 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 POLG2Q9UHN1 485 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 GLS2Q9UI32 602 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 GMEB2Q9UKD1 530 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 NDRG4Q9ULP0 352 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MAPRE3Q9UPY8 281 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 V9GYH0 126 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MGAMO43451 1857 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PARP14Q460N5 1801 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 COL2A1P02458 1487 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF638Q14966 1978 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-207ENST00000469334 LINC00854A0A1B0GVQ3 168 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms