RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 GFRALQ6UXV0 394 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 GDPD4Q6W3E5 623 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 LINC00696Q6ZRV3 163 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 HAPLN4Q86UW8 402 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 TICAM1Q8IUC6 712 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 IQCF2Q8IXL9 164 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 MAML2Q8IZL2 1156 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 C1orf87Q8N0U7 546 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CNTROBQ8N137 903 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 SIX6OS1Q8N1H7 587 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 PCDH20Q8N6Y1 951 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 GMCL1P1Q8NEA9 526 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 FIBINQ8TAL6 211 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 KIAA1524Q8TCG1 905 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 KCNE4Q8WWG9 221 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 MRPS27Q92552 414 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 ZNF75CPQ92670 426 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 GTF3C6Q969F1 213 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 SMARCE1Q969G3 411 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CNDP1Q96KN2 507 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CFAP57Q96MR6 1250 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 UHRF2Q96PU4 802 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 PIP5K1AQ99755 562 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 TXN2Q99757 166 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 FERMT1Q9BQL6 677 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 NYXQ9GZU5 481 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CSTL1Q9H114 145 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 KIF9Q9HAQ2 790 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 ASAH2Q9NR71 780 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 RBM28Q9NW13 759 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 ZNHIT6Q9NWK9 470 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 HOXC10Q9NYD6 342 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 C6orf203Q9P0P8 240 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 HAO1Q9UJM8 370 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 TUBE1Q9UJT0 475 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CPSF3Q9UKF6 684 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 INTS6Q9UL03 887 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 EXOC7Q9UPT5 735 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 PIN4Q9Y237 131 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 LOXL2Q9Y4K0 774 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CEPT1Q9Y6K0 416 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 EIF3CLB5ME19 914 aaKnown RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 GPR89AB7ZAQ6 455 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 DNM1LO00429 736 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 CTDSP2O14595 271 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 LMX1BO60663 402 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 DDHD2O94830 711 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 TRIM16O95361 564 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 PLGP00747 810 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 EGFP01133 1207 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 GPR89BP0CG08 455 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 CDH1P12830 882 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 HOXC8P31273 242 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 HSPA1LP34931 641 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 CASP3P42574 277 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 ASMTP46597 345 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 STAT2P52630 851 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 CSNK2A1P68400 391 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 FOXM1Q08050 763 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 C17orf67Q0P5P2 114 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 SYT16Q17RD7 645 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 C15orf59Q2T9L4 293 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 CRY2Q49AN0 593 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 ACCSLQ4AC99 568 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 NHSL2Q5HYW2 709 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 IRAK1BP1Q5VVH5 260 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 DUS1LQ6P1R4 473 aaKnown RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 ERN2Q76MJ5 926 aaKnown RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 DPPA4Q7L190 304 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 CHST9Q7L1S5 443 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 OTOAQ7RTW8 1153 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 MIER3Q7Z3K6 550 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 ADCK2Q7Z695 626 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 RABEPKQ7Z6M1 372 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 TMEM219Q86XT9 240 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 DCUN1D3Q8IWE4 304 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 CCDC13Q8IYE1 715 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 RTL3Q8N8U3 475 aaKnown RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 ZBTB8BQ8NAP8 495 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 CSNK2A3Q8NEV1 391 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 SLC20A1Q8WUM9 679 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 PDLIM5Q96HC4 596 aaKnown RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 FER1L6-AS2Q96M78 137 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 PRAM1Q96QH2 718 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 ABHD1Q96SE0 405 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 CMKLR1Q99788 373 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 SLX1AQ9BQ83 275 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 NAA11Q9BSU3 229 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 UTP14AQ9BVJ6 771 aaKnown RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 C1QTNF5Q9BXJ0 243 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 MMP28Q9H239 520 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 DPH5Q9H2P9 285 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 RWDD1Q9H446 243 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 SUDS3Q9H7L9 328 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 SLC28A3Q9HAS3 691 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 MBNL1Q9NR56 388 aaKnown RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 KLHL1Q9NR64 748 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 PCDHB16Q9NRJ7 776 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 LEF1Q9UJU2 399 aaPredicted RBP3.65□□□□□ -1.83
VPS50-209ENST00000467326 PADI1Q9ULC6 663 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms