RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 FARSAQ9Y285 508 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-203ENST00000466034 SEC16AO15027 2179 aa12.12□□□□□ -0.47
SOX2-OT-203ENST00000466034 SPTBP11277 2137 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 K7EM74 188 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 IFRD1O00458 451 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 RAB40ALP0C0E4 278 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 CDH3P22223 829 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 CD97P48960 835 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 TMPRSS15P98073 1019 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 GPS2Q13227 327 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 KLF1Q13351 362 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 KRT33BQ14525 404 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 GPR19Q15760 415 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 FAM199XQ6PEV8 388 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 RAD9BQ6WBX8 426 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 ARHGEF18Q6ZSZ5 1173 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 SERPINA9Q86WD7 417 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 TMEM126BQ8IUX1 230 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 DSELQ8IZU8 1212 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 OR4E2Q8NGC2 313 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 STYXQ8WUJ0 223 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 LCN9Q8WX39 176 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 CPT1BQ92523 772 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 MIB2Q96AX9 1013 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 PPM1MQ96MI6 270 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 RUFY1Q96T51 708 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 MVB12BQ9H7P6 319 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 FANCEQ9HB96 536 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 SOHLH2Q9NX45 425 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 AMFRQ9UKV5 643 aa12.11□□□□□ -0.47
SOX2-OT-203ENST00000466034 GOLGA6L9A6NEM1 432 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 SLC9B1P1A6NJY1 282 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 MIF4GDA9UHW6 222 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 BTN3A3O00478 584 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 PSMD3O43242 534 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 AP2A2O94973 939 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 METTL18O95568 372 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 KLK3P07288 261 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 NR1D1P20393 614 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 PRDX3P30048 256 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 RORAP35398 523 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 ARCN1P48444 511 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 CDKN1CP49918 316 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 RPS18P62269 152 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 CACNG1Q06432 222 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 BOP1Q14137 746 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 ZRANB3Q5FWF4 1079 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 ZNF789Q5FWF6 425 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 FBXO38Q6PIJ6 1188 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 ASB18Q6ZVZ8 466 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 UBL4BQ8N7F7 174 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 TEX19Q8NA77 164 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 SLC38A9Q8NBW4 561 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 OR52E1Q8NGJ3 308 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 ADAMTS17Q8TE56 1095 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 MR1Q95460 341 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 CDKN2AIPNLQ96HQ2 116 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 FERD3LQ96RJ6 166 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 SRMSQ9H3Y6 488 aa12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 PCDHGA9Q9Y5G4 932 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-203ENST00000466034 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 MEN1O00255 615 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 QSOX1O00391 747 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 BTN3A1O00481 513 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 CCL22O00626 93 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 AP2A1O95782 977 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 ST6GAL1P15907 406 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 PDHA2P29803 388 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 NSG1P42857 185 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 ABRQ12979 859 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 IL10RAQ13651 578 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 UBAP2LQ14157 1087 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 ITIH4Q14624 930 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 DBN1Q16643 649 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 P3H1Q32P28 736 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 PAPD7Q5XG87 772 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 PIANPQ8IYJ0 282 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 SYCE1Q8N0S2 351 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 FAM71DQ8N9W8 422 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 OR1L3Q8NH93 324 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 SLC35B2Q8TB61 432 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 TRAPPC9Q96Q05 1148 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 TLR10Q9BXR5 811 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 NLNQ9BYT8 704 aa12.09□□□□□ -0.47
SOX2-OT-203ENST00000466034 TRIM55Q9BYV6 548 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms