RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 NTN4Q9HB63 628 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 ZNF490Q9ULM2 529 aaPredicted RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 CDC14AQ9UNH5 594 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 K7EPI3 171 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 PRRG1O14668 218 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 SEC22BO75396 215 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 ABLIM3O94929 683 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 EPB42P16452 691 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 CA5AP35218 305 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 PMS2P3Q13401 168 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 DAG1Q14118 895 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 TTLL9Q3SXZ7 439 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 TPGS2Q68CL5 300 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 STK32CQ86UX6 486 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 ZDHHC13Q8IUH4 622 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 LIX1Q8N485 282 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 GTF2H4Q92759 462 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 RHBDF1Q96CC6 855 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 CCDC115Q96NT0 180 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 SH3GL1Q99961 368 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 VN1R3Q9BXE9 311 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 ING2Q9H160 280 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 HMX1Q9NP08 348 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-204ENST00000465425 FARSBQ9NSD9 589 aaKnown RBP17.97■□□□□ 0.47
SYNE4-204ENST00000465425 PCDHGA11Q9Y5H2 935 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 HEMK1Q9Y5R4 338 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-204ENST00000465425 SMAD6O43541 496 aaKnown RBP17.97■□□□□ 0.47
SYNE4-204ENST00000465425 IL6P05231 212 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 EEF1B2P24534 225 aaKnown RBP17.97■□□□□ 0.47
SYNE4-204ENST00000465425 HNF1BP35680 557 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 CYP4F3Q08477 520 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 ARHGEF7Q14155 803 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 KIAA0040Q15053 153 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 SMU1Q2TAY7 513 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 DNAJC14Q6Y2X3 702 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-204ENST00000465425 KCTD8Q6ZWB6 473 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 FBXO30Q8TB52 745 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 PNPT1Q8TCS8 783 aaKnown RBP17.97■□□□□ 0.47
SYNE4-204ENST00000465425 IGSF21Q96ID5 467 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 DCUN1D5Q9BTE7 237 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 HTATIP2Q9BUP3 242 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 HIPK3Q9H422 1215 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 GORASP2Q9H8Y8 452 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 LRTM1Q9HBL6 345 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 LIMD1Q9UGP4 676 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 ADGRE2Q9UHX3 823 aa17.97■□□□□ 0.47
SYNE4-204ENST00000465425 A8MX80 341 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 PGRP06401 933 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 EBLN1P0CF75 366 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 THRBP10828 461 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 BPIP17213 487 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 GKP32189 559 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 MAPK8P45983 427 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 YAP1P46937 504 aaKnown RBP17.96■□□□□ 0.47
SYNE4-204ENST00000465425 RAB39AQ14964 217 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 SPANXN4Q5MJ08 99 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 DNAJB7Q7Z6W7 309 aaPredicted RBP17.96■□□□□ 0.47
SYNE4-204ENST00000465425 APCDD1Q8J025 514 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 ZNF420Q8TAQ5 688 aaPredicted RBP17.96■□□□□ 0.47
SYNE4-204ENST00000465425 ALG14Q96F25 216 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 MUS81Q96NY9 551 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 SLC22A12Q96S37 553 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 NTMT1Q9BV86 223 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 TRPS1Q9UHF7 1281 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 TET1Q8NFU7 2136 aa17.96■□□□□ 0.47
SYNE4-204ENST00000465425 TRBV5-4A0A0C4DH59 114 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 UPK1AO00322 258 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 WDR47O94967 919 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 PRSS23O95084 383 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 INHAP05111 366 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 ALPLP05186 524 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 SPAM1P38567 509 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 HLCSP50747 726 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 CHRNA6Q15825 494 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 GPRC6AQ5T6X5 926 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 GPR107Q5VW38 600 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 MACC1Q6ZN28 852 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 RGL4Q8IZJ4 473 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 ARL14EPQ8N8R7 260 aaPredicted RBP17.95■□□□□ 0.46
SYNE4-204ENST00000465425 TERB1Q8NA31 727 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 CD99L2Q8TCZ2 262 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 FAM162AQ96A26 154 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 SCLYQ96I15 445 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 ATP13A3Q9H7F0 1226 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 IFT80Q9P2H3 777 aaPredicted RBP17.95■□□□□ 0.46
SYNE4-204ENST00000465425 DNMT3BQ9UBC3 853 aaKnown RBP17.95■□□□□ 0.46
SYNE4-204ENST00000465425 NEUROG3Q9Y4Z2 214 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 ELOVL7A1L3X0 281 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 LOC730098B7Z3J9 87 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 G3V2T6 193 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 GNGT2O14610 69 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 SOCS5O75159 536 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 STK16O75716 305 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 CST1P01037 141 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 NEDD8Q15843 81 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 GPR33Q49SQ1 333 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 SPOUT1Q5T280 376 aaKnown RBP17.95■□□□□ 0.46
SYNE4-204ENST00000465425 GRAMD4Q6IC98 578 aa17.95■□□□□ 0.46
SYNE4-204ENST00000465425 METTL2BQ6P1Q9 378 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms