RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 OR4D9Q8NGE8 314 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 IFT81Q8WYA0 676 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 GATA6Q92908 595 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 FAM136AQ96C01 138 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 FAM129AQ9BZQ8 928 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 STRADBQ9C0K7 418 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 NRSN2Q9GZP1 204 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 SEMA6CQ9H3T2 930 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 KIR3DX1Q9H7L2 352 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 MVB12BQ9H7P6 319 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 LATS2Q9NRM7 1088 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 SLC24A2Q9UI40 661 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 ASF1AQ9Y294 204 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 COMMD10Q9Y6G5 202 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 CHD8Q9HCK8 2581 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 IGHV5-10-1A0A0J9YXX1 117 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 AHSGP02765 367 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 MPSTP25325 297 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 GABRB3P28472 473 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 SSTR1P30872 391 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 MGAT5Q09328 741 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 ABRQ12979 859 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 PRKG2Q13237 762 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 PHF19Q5T6S3 580 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 CAPN12Q6ZSI9 719 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 C3orf62Q6ZUJ4 267 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 GALNT7Q86SF2 657 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 PLXDC1Q8IUK5 500 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 ACVR1CQ8NER5 493 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 JPH3Q8WXH2 748 aaPredicted RBP14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 KCNJ9Q92806 393 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 LIN37Q96GY3 246 aaPredicted RBP14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 C9orf72Q96LT7 481 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 L2HGDHQ9H9P8 463 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 OGFRQ9NZT2 677 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 TMEM9Q9P0T7 183 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 ZFATQ9P243 1243 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 GALPQ9UBC7 116 aa14.14□□□□□ -0.15
SQSTM1-205ENST00000464493 CCDC187A0A096LP49 1063 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 ESPNB1AK53 854 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 GSTA2P09210 222 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 CAPZBP47756 277 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 CLCN7P51798 805 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 TRA2AQ13595 282 aaKnown RBP eCLIP14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 KIF26BQ2KJY2 2108 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 KLHL35Q6PF15 583 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 CYS1Q717R9 158 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 TBC1D21Q8IYX1 336 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 ZBTB2Q8N680 514 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 OR5AR1Q8NGP9 310 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 OR5K2Q8NHB8 316 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 CFAP61Q8NHU2 1237 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 WDR36Q8NI36 951 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 RSC1A1Q92681 617 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 CCDC74BQ96LY2 380 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 AARSD1Q9BTE6 412 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 TMEM121BQ9BXQ6 578 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 TRIT1Q9H3H1 467 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 TFB2MQ9H5Q4 396 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 PDP2Q9P2J9 529 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 KLHL42Q9P2K6 505 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 SLC17A6Q9P2U8 582 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 MTRF1LQ9UGC7 380 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 POLG2Q9UHN1 485 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 MED16Q9Y2X0 877 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 AK5Q9Y6K8 562 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 FRYQ5TBA9 3013 aa14.13□□□□□ -0.15
SQSTM1-205ENST00000464493 C1QTNF9BB2RNN3 333 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 CAPN5O15484 640 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 VPS26AO75436 327 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 RPN2P04844 631 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 MPOP05164 745 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 C1QTNF9P0C862 333 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 THRAP10827 490 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 LSSP48449 732 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 GPX6P59796 221 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 EIF3IQ13347 325 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 RTP5Q14D33 572 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 TTLL9Q3SXZ7 439 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 ACSBG2Q5FVE4 666 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 C3orf38Q5JPI3 329 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 SNAP47Q5SQN1 464 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 UNQ6494/PRO21346Q6UXR6 183 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 CEP128Q6ZU80 1094 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 RAB11FIP2Q7L804 512 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 SLC26A11Q86WA9 606 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 SIDT2Q8NBJ9 832 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 RCBTB1Q8NDN9 531 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 OR4E2Q8NGC2 313 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 OR52E1Q8NGJ3 308 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 SKA2Q8WVK7 121 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 LCN9Q8WX39 176 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 CDKL2Q92772 493 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 INPP5DQ92835 1189 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 NXPE2Q96DL1 559 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 ZDHHC12Q96GR4 267 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 NDNQ99608 321 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 CMKLR1Q99788 373 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 HGH1Q9BTY7 390 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms