RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 VSTM4Q8IW00 320 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 CARFQ8N187 725 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 ZBTB2Q8N680 514 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 ACVR1CQ8NER5 493 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 PRR7Q8TB68 274 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 HM13Q8TCT9 377 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 LINC00615Q96LM1 132 aaPredicted RBP14.87□□□□□ -0.03
CMSS1-202ENST00000463526 LRFN5Q96NI6 719 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 GORASP1Q9BQQ3 440 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 GBA3Q9H227 469 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 SERTAD3Q9UJW9 196 aa14.87□□□□□ -0.03
CMSS1-202ENST00000463526 MACROD2A1Z1Q3 448 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 C5orf60A6NFR6 353 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 TCP11X1B4DZS4 312 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 MAP3K7O43318 606 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 CEACAM4O75871 244 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 PYGMP11217 842 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 PSMB4P28070 264 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 OTX2P32243 289 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 PRLHRP49683 370 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 SPARCL1Q14515 664 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 ZNF789Q5FWF6 425 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 SLC6A19Q695T7 634 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 ITPRIPL1Q6GPH6 555 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 KATNAL2Q8IYT4 538 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 RBMXL3Q8N7X1 1067 aaKnown RBP14.86□□□□□ -0.03
CMSS1-202ENST00000463526 Q8NA96 180 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 COPS8Q99627 209 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 FAM118BQ9BPY3 351 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 HGH1Q9BTY7 390 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 GPR83Q9NYM4 423 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 INTUQ9ULD6 942 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 TFR2Q9UP52 801 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 PCDHGB7Q9Y5F8 929 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 TEX15Q9BXT5 2789 aa14.86□□□□□ -0.03
CMSS1-202ENST00000463526 KLHL33A6NCF5 533 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 C9J4A7 227 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 CFAP99D6REC4 459 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 E7EQ34 232 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 MATN2O00339 956 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 IFRD1O00458 451 aaPredicted RBP14.85□□□□□ -0.03
CMSS1-202ENST00000463526 ZNF749O43361 778 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 KRT86O43790 486 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 CRTAMO95727 393 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 ATP1B2P14415 290 aaPredicted RBP14.85□□□□□ -0.03
CMSS1-202ENST00000463526 ITGALP20701 1170 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 PDHA2P29803 388 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 ADRA1AP35348 466 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 MAGEA1P43355 309 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 CDKN1CP49918 316 aaPredicted RBP14.85□□□□□ -0.03
CMSS1-202ENST00000463526 PRPSAP1Q14558 356 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 NCF4Q15080 339 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 TCEAL1Q15170 157 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 MLIPQ5VWP3 458 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 RANBP10Q6VN20 620 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 BBS12Q6ZW61 710 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 TAS2R42Q7RTR8 314 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 TRIM73Q86UV7 250 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 NXPE1Q8N323 547 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 TMEM102Q8N9M5 508 aaPredicted RBP14.85□□□□□ -0.03
CMSS1-202ENST00000463526 OR52E1Q8NGJ3 308 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 KRT35Q92764 455 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 N4BP2L2Q92802 583 aaPredicted RBP14.85□□□□□ -0.03
CMSS1-202ENST00000463526 ULK4Q96C45 1275 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 C19orf60Q96EN9 201 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 SGSM3Q96HU1 749 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 TRAPPC9Q96Q05 1148 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 COG4Q9H9E3 785 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 SYTL2Q9HCH5 934 aa14.85□□□□□ -0.03
CMSS1-202ENST00000463526 NBPF19A0A087WUL8 3843 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 SEC16AO15027 2179 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 LDB2O43679 373 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 PRSS56P0CW18 603 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 AGXTP21549 392 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 MC4RP32245 332 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 RRADP55042 308 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 DEFB110Q30KQ9 67 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 ZRANB3Q5FWF4 1079 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 ANKRD20A2Q5SQ80 823 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 ANKRD20A1Q5TYW2 823 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 C1orf189Q5VU69 101 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 ANKRD20A3Q5VUR7 823 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 CDHR3Q6ZTQ4 885 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 MED25Q71SY5 747 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 SNX20Q7Z614 316 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 HOOK3Q86VS8 718 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 AMIGO1Q86WK6 493 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 RAB43Q86YS6 212 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 ACTL9Q8TC94 416 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 PNPLA2Q96AD5 504 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 FERMT1Q9BQL6 677 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 SLC29A3Q9BZD2 475 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 OR52A5Q9H2C5 316 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 ACTR10Q9NZ32 417 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.84□□□□□ -0.03
CMSS1-202ENST00000463526 SHANK1Q9Y566 2161 aa14.84□□□□□ -0.03
CMSS1-202ENST00000463526 C17orf113A0A1B0GUU1 675 aa14.83□□□□□ -0.04
CMSS1-202ENST00000463526 C2orf74A8MZ97 194 aa14.83□□□□□ -0.04
CMSS1-202ENST00000463526 APOC4-APOC2K7ER74 178 aa14.83□□□□□ -0.04
CMSS1-202ENST00000463526 MASP2O00187 686 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms