RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ETV5P41161 510 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 MAPK9P45984 424 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 LEPRP48357 1165 aaKnown RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 ARL4CP56559 192 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 PPP1CAP62136 330 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 PLOD1Q02809 727 aaPredicted RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 THOC5Q13769 683 aaKnown RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 FRG1Q14331 258 aaKnown RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 PTRHD1Q6GMV3 140 aaKnown RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 TRMT10BQ6PF06 316 aaKnown RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 KCNMB4Q86W47 210 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 SPNS2Q8IVW8 549 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 CNTN4Q8IWV2 1026 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 FBXO39Q8N4B4 442 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 MMGT1Q8N4V1 131 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 ASZ1Q8WWH4 475 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 LRRC1Q9BTT6 524 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 FBXO6Q9NRD1 293 aaPredicted RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 SEMA5BQ9P283 1151 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 ZC3H7BQ9UGR2 993 aaKnown RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 GNPTGQ9UJJ9 305 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 FBXO5Q9UKT4 447 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 ZMIZ1Q9ULJ6 1067 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 CHMP2BQ9UQN3 213 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 LOXL2Q9Y4K0 774 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 COLEC10Q9Y6Z7 277 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 F8W8V4 182 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 CAPN5O15484 640 aaPredicted RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 KIF1CO43896 1103 aaKnown RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 NIPSNAP2O75323 286 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 HAUS5O94927 633 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 CCL4P13236 92 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 PKMP14618 531 aaKnown RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 NDUFS1P28331 727 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 MPP1Q00013 466 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 TIAL1Q01085 375 aaKnown RBP eCLIP17.22■□□□□ 0.35
VPS52-214ENST00000463486 HSPA14Q0VDF9 509 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 PDIA2Q13087 525 aaKnown RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 TUBB2AQ13885 445 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 TBC1D25Q3MII6 688 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 CLEC14AQ86T13 490 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 PLXDC1Q8IUK5 500 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 ANKMY2Q8IV38 441 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 LSMEM2Q8N112 164 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 OTUD6BQ8N6M0 293 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 BMPERQ8N8U9 685 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 NOA1Q8NC60 698 aaKnown RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 C2CD4AQ8NCU7 369 aaPredicted RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 OR5AR1Q8NGP9 310 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 TMEM159Q96B96 161 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 C9orf72Q96LT7 481 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 FERD3LQ96RJ6 166 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 TUBB2BQ9BVA1 445 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 TFB2MQ9H5Q4 396 aaKnown RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 MVB12BQ9H7P6 319 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 IARS2Q9NSE4 1012 aaKnown RBP17.22■□□□□ 0.35
VPS52-214ENST00000463486 HEBP2Q9Y5Z4 205 aa17.22■□□□□ 0.35
VPS52-214ENST00000463486 OR5K3A6NET4 321 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 IFRD1O00458 451 aaPredicted RBP17.21■□□□□ 0.35
VPS52-214ENST00000463486 TNFSF15O95150 251 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 ITGA2BP08514 1039 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 ANKRD34CP0C6C1 535 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 FGF3P11487 239 aaPredicted RBP17.21■□□□□ 0.35
VPS52-214ENST00000463486 AMD1P17707 334 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 ITIH1P19827 911 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 CLCN7P51798 805 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 CSE1LP55060 971 aaKnown RBP17.21■□□□□ 0.35
VPS52-214ENST00000463486 SLC7A5Q01650 507 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 GRB7Q14451 532 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 TEDDM1Q5T9Z0 273 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 CNSTQ6PJW8 725 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 FBXO36Q8NEA4 188 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 ACVR1CQ8NER5 493 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 CERS2Q96G23 380 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 ZNF578Q96N58 590 aaPredicted RBP17.21■□□□□ 0.35
VPS52-214ENST00000463486 PANX3Q96QZ0 392 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 SLC30A3Q99726 388 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 CMKLR1Q99788 373 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 MOCS1Q9NZB8 636 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 SLC17A6Q9P2U8 582 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 VPS9D1Q9Y2B5 631 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 RAXQ9Y2V3 346 aa17.21■□□□□ 0.35
VPS52-214ENST00000463486 H3BMM5 538 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 AGRPO00253 132 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 NDC80O14777 642 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 PFDN6O15212 129 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
VPS52-214ENST00000463486 AHSGP02765 367 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 APOA4P06727 396 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 MLLT3P42568 568 aaPredicted RBP17.2■□□□□ 0.34
VPS52-214ENST00000463486 ERVPABLB-1P60509 514 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 CALCOCO2Q13137 446 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 PRKG2Q13237 762 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 SYTL3Q4VX76 610 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 SNAP47Q5SQN1 464 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 PLEKHS1Q5SXH7 462 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 ZNF449Q6P9G9 518 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 TBC1D21Q8IYX1 336 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms