RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TUBB2BQ9BVA1 445 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 GPR87Q9BY21 358 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 TSGA10Q9BZW7 698 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 TWSG1Q9GZX9 223 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 MVB12BQ9H7P6 319 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 VPS37BQ9H9H4 285 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 SYTL2Q9HCH5 934 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 LHX9Q9NQ69 397 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 C1GALT1Q9NS00 363 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 FGF21Q9NSA1 209 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 KCND1Q9NSA2 647 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 LNPEPQ9UIQ6 1025 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 CROTQ9UKG9 612 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 POMT2Q9UKY4 750 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 PCDHB3Q9Y5E6 796 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 HEMK1Q9Y5R4 338 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-207ENST00000461798 QSOX1O00391 747 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 IFRD1O00458 451 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-207ENST00000461798 LIN7AO14910 233 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-207ENST00000461798 KRT86O43790 486 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 EBLN1P0CF75 366 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 PRSS56P0CW18 603 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 PRKAR1AP10644 381 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 ADRA1DP25100 572 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 PDHA2P29803 388 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 FOXN2P32314 431 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 ARL4DP49703 201 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 CSRP3P50461 194 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 PLOD1Q02809 727 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-207ENST00000461798 ACVR1Q04771 509 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 PRKAA1Q13131 559 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 SEMA5AQ13591 1074 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 DNASE1L3Q13609 305 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 BOP1Q14137 746 aaKnown RBP8.9□□□□□ -0.98
BRCA1-207ENST00000461798 KRT33BQ14525 404 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 KCNAB1Q14722 419 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 DEFB109BQ30KR1 87 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 TMTC4Q5T4D3 741 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 LYPLAL1Q5VWZ2 237 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 CERS6Q6ZMG9 384 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 NLRP9Q7RTR0 991 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 TAS2R42Q7RTR8 314 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 CLDN19Q8N6F1 224 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 SPC24Q8NBT2 197 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 OR52K1Q8NGK4 314 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 LCN9Q8WX39 176 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 ATG4AQ8WYN0 398 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 SEC14L1Q92503 715 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 TFGQ92734 400 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-207ENST00000461798 ALS2CR12Q96Q35 445 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 PITPNM3Q9BZ71 974 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 SRMSQ9H3Y6 488 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 ETNK1Q9HBU6 452 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 MRPS18BQ9Y676 258 aaKnown RBP8.9□□□□□ -0.98
BRCA1-207ENST00000461798 KCNMB2Q9Y691 235 aa8.9□□□□□ -0.98
BRCA1-207ENST00000461798 SLC5A10A0PJK1 596 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 HEATR9A2RTY3 570 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 CCDC162PA2VCL2 907 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 SLC9B1P1A6NJY1 282 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 BTN3A3O00478 584 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 ARHGAP6O43182 974 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 CREG1O75629 220 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 ZIC2O95409 532 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 POLR2CP19387 275 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 MSNP26038 577 aaKnown RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 ACADLP28330 430 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 PRDX3P30048 256 aaKnown RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 GSDMDP57764 484 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 SEPT6Q14141 434 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 CCNG2Q16589 344 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 TSTD2Q5T7W7 516 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 SEL1L2Q5TEA6 688 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 MEI1Q5TIA1 1274 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 C16orf46Q6P387 395 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 DRICH1Q6PGQ1 229 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 PRICKLE2Q7Z3G6 844 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 AMIGO1Q86WK6 493 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 ADGRF3Q8IZF5 1079 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 PHC3Q8NDX5 983 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 OR52E1Q8NGJ3 308 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 OR13J1Q8NGT2 312 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 C9orf43Q8TAL5 461 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 CT55Q8WUE5 264 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 C1orf54Q8WWF1 131 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 ABHD17AQ96GS6 310 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 PPM1MQ96MI6 270 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 CHRNA10Q9GZZ6 450 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 AKIRIN1Q9H9L7 192 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 CASS4Q9NQ75 786 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 PIH1D1Q9NWS0 290 aaKnown RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 SMARCAL1Q9NZC9 954 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 FAM8A1Q9UBU6 413 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 GUCA1BQ9UMX6 200 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF148Q9UQR1 794 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 POLHQ9Y253 713 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 DRG1Q9Y295 367 aaKnown RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 PRSS21Q9Y6M0 314 aa8.89□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF106Q9H2Y7 1883 aaKnown RBP8.89□□□□□ -0.99
BRCA1-207ENST00000461798 PIPSLA2A3N6 862 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms