RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ARL15Q9NXU5 204 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 LEF1Q9UJU2 399 aaPredicted RBP19.81■□□□□ 0.76
CCM2-203ENST00000461377 TCRBV3S1A0A5B6 114 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 CCDC154A6NI56 674 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 FADS2P1A8MWK0 482 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 SLC16A5O15375 505 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 PAPLNO95428 1278 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 AQP4P55087 323 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 ST8SIA6P61647 398 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 CAPRIN1Q14444 709 aaKnown RBP19.81■□□□□ 0.76
CCM2-203ENST00000461377 TLR1Q15399 786 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 ZFAND4Q86XD8 727 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 TCAIMQ8N3R3 496 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 PPP3R2Q96LZ3 170 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 TRIM54Q9BYV2 358 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 COPS7BQ9H9Q2 264 aaPredicted RBP19.81■□□□□ 0.76
CCM2-203ENST00000461377 CMTM6Q9NX76 183 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 GMPR2Q9P2T1 348 aaKnown RBP19.81■□□□□ 0.76
CCM2-203ENST00000461377 RNF11Q9Y3C5 154 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 PIKFYVEQ9Y2I7 2098 aa19.81■□□□□ 0.76
CCM2-203ENST00000461377 LOC730098B7Z3J9 87 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 DNAJA2O60884 412 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 HSD17B1P14061 328 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 NFYCQ13952 458 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 BOP1Q14137 746 aaKnown RBP19.8■□□□□ 0.76
CCM2-203ENST00000461377 SMU1Q2TAY7 513 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 AP5B1Q2VPB7 878 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 GRAMD1BQ3KR37 738 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 SPATS1Q496A3 300 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 PAGE3Q5JUK9 113 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 FAM109BQ6ICB4 259 aaPredicted RBP19.8■□□□□ 0.76
CCM2-203ENST00000461377 TMC5Q6UXY8 1006 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 NEK10Q6ZWH5 1172 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 PARS2Q7L3T8 475 aaKnown RBP19.8■□□□□ 0.76
CCM2-203ENST00000461377 LRRC70Q7Z2Q7 622 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 HOMEZQ8IX15 550 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 SAMD11Q96NU1 681 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 PKP2Q99959 881 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 SLC29A3Q9BZD2 475 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 EBF3Q9H4W6 596 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 SLC32A1Q9H598 525 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 DTNAQ9Y4J8 743 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 PCDHA9Q9Y5H5 950 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 MYO7AQ13402 2215 aa19.8■□□□□ 0.76
CCM2-203ENST00000461377 DYTNA2CJ06 578 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 GFYI3L273 518 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 SLC28A1O00337 649 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 CAPNS1P04632 268 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 EPORP19235 508 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 PRKG2Q13237 762 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 ZNF284Q2VY69 593 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 GAB4Q2WGN9 574 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 POM121L1PQ3SYA9 428 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 FAM78AQ5JUQ0 283 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 RARS2Q5T160 578 aaKnown RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 IL23RQ5VWK5 629 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 CYP20A1Q6UW02 462 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 LIPIQ6XZB0 460 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 TRIM46Q7Z4K8 759 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 RASGRP3Q8IV61 690 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 BPIFB1Q8TDL5 484 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 NXPE3Q969Y0 559 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 VPS35Q96QK1 796 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 NR1H4Q96RI1 486 aaPredicted RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 ACTL8Q9H568 366 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 KLQ9UEF7 1012 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 GRXCR2A6NFK2 248 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 EIF4E1BA6NMX2 242 aaKnown RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 MANBAO00462 879 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 FFAR3O14843 346 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 ANKRD28O15084 1053 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 GPR42O15529 346 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 RGS14O43566 566 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 RNASEH2AO75792 299 aaKnown RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 NFATC1O95644 943 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 FTH1P02794 183 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 G6PDP11413 515 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 ERVK-21P61565 698 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 MESP2Q0VG99 397 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 ZXDCQ2QGD7 858 aaPredicted RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 RFTN2Q52LD8 501 aaPredicted RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 ERAP2Q6P179 960 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 DHFR2Q86XF0 187 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 TICAM1Q8IUC6 712 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 NPAS3Q8IXF0 933 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 TMEM102Q8N9M5 508 aaPredicted RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 BTN2A2Q8WVV5 523 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 GATA6Q92908 595 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 TMEM125Q96AQ2 219 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 FAM83CQ9BQN1 747 aa19.79■□□□□ 0.76
CCM2-203ENST00000461377 POLR3HQ9Y535 204 aaPredicted RBP19.79■□□□□ 0.76
CCM2-203ENST00000461377 PRRT4C9JH25 899 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 HIST1H2AGP0C0S8 130 aaPredicted RBP19.78■□□□□ 0.76
CCM2-203ENST00000461377 HIST1H2ADP20671 130 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 SLC6A12P48065 614 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 SLC6A11P48066 632 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 HNMTP50135 292 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 YBX1P67809 324 aaKnown RBP19.78■□□□□ 0.76
CCM2-203ENST00000461377 BNIP2Q12982 314 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 TIGD2Q4W5G0 525 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms