RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 NID2Q14112 1375 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 DUXAA6NLW8 204 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 UGT1A3P35503 534 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 CPSF6Q16630 551 aaKnown RBP eCLIP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 ZIK1Q3SY52 487 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 KIAA0895Q8NCT3 520 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 ZBED6CLQ96FA7 236 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 TUBA1CQ9BQE3 449 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 ZNF471Q9BX82 626 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 ZNF282Q9UDV7 671 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 POLLQ9UGP5 575 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 TLL2Q9Y6L7 1015 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 KIF13BQ9NQT8 1826 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 PMM2O15305 246 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 HCN1O60741 890 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 RNASEH2AO75792 299 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 NADKO95544 446 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 ETS2P15036 469 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 HSD11B1P28845 292 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 TOB1P50616 345 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 SELENOVP59797 346 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 SP3Q02447 781 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 FOLH1Q04609 750 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 RHEBQ15382 184 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 DUS1LQ6P1R4 473 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 HDDC3Q8N4P3 179 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 OR2L8Q8NGY9 312 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 DQX1Q8TE96 717 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 IL12RB2Q99665 862 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 MKKSQ9NPJ1 570 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 C19orf25Q9UFG5 118 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 RICTORQ6R327 1708 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 PDPK1O15530 556 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 TLR5O60602 858 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 LINGO3P0C6S8 592 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 PRPS2P11908 318 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 SLC13A2Q13183 592 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 CRY2Q49AN0 593 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 OR8H1Q8NGG4 311 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 PHB2Q99623 299 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 CFAP97Q9P2B7 532 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 PTPRJQ12913 1337 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 PCCBP05166 539 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 MAPK3P27361 379 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 RFX5P48382 616 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 CAV3P56539 151 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 LRIF1Q5T3J3 769 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 TRABD2AQ86V40 505 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 SHDQ96IW2 340 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 TUBGCP5Q96RT8 1024 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 AGO3Q9H9G7 860 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 GHRLQ9UBU3 117 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 SMIM35A0A1B0GVV1 85 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 ELOVL7A1L3X0 281 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 OR2AT4A6NND4 320 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 CD44P16070 742 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 GRK5P34947 590 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 PHC1P78364 1004 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 USP49Q70CQ1 688 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 ANKS1BQ7Z6G8 1248 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 OXR1Q8N573 874 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 NUSAP1Q9BXS6 441 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 SRMSQ9H3Y6 488 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 TLE6Q9H808 572 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 SMPD3Q9NY59 655 aaPredicted RBP8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 FNIP2Q9P278 1114 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 BTRCQ9Y297 605 aa8.77□□□□□ -1.01
SHROOM4-203ENST00000460112 A0A0J9YYE9 177 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 COQ9O75208 318 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 DBIP07108 87 aaKnown RBP8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 PGAM2P15259 253 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 ACTR1BP42025 376 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 KCTD8Q6ZWB6 473 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 CLNKQ7Z7G1 428 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 ZC3HC1Q86WB0 502 aaKnown RBP8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 NKD2Q969F2 451 aaPredicted RBP8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 MARK4Q96L34 752 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 ACO2Q99798 780 aaKnown RBP8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 M0QX08 132 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 GNAZP19086 355 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 VLDLRP98155 873 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 TLR1Q15399 786 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 ECHDC2Q86YB7 292 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 MAB21L3Q8N8X9 362 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 TMEM145Q8NBT3 493 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 HTRA1Q92743 480 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 N4BP2Q86UW6 1770 aaPredicted RBP8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 OR2AG2A6NM03 316 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 CLPXO76031 633 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 IFNA7P01567 189 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 GSTM3P21266 225 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 GLRA2P23416 452 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 NOGQ13253 232 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 AUHQ13825 339 aaKnown RBP8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 STYXQ8WUJ0 223 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 SNRNP25Q9BV90 132 aaKnown RBP8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 GDAP2Q9NXN4 497 aa8.76□□□□□ -1.01
SHROOM4-203ENST00000460112 EDF1O60869 148 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms