RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 MKS1Q9NXB0 559 aa12.51□□□□□ -0.41
C4A-244ENST00000460060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
C4A-244ENST00000460060 DCDC2Q9UHG0 476 aa12.51□□□□□ -0.41
C4A-244ENST00000460060 GPR34Q9UPC5 381 aa12.51□□□□□ -0.41
C4A-244ENST00000460060 SLC17A4Q9Y2C5 497 aa12.51□□□□□ -0.41
C4A-244ENST00000460060 AK5Q9Y6K8 562 aa12.51□□□□□ -0.41
C4A-244ENST00000460060 TMEM202A6NGA9 273 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 CHUKO15111 745 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 KPNA5O15131 536 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 YKT6O15498 198 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 PRPF4O43172 522 aaKnown RBP eCLIP12.5□□□□□ -0.41
C4A-244ENST00000460060 TYROBPO43914 113 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 WISP3O95389 354 aaPredicted RBP12.5□□□□□ -0.41
C4A-244ENST00000460060 GSTA1P08263 222 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 GSTM1P09488 218 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 HTR1BP28222 390 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 CD38P28907 300 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 CCR7P32248 378 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 CRHR1P34998 444 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 ACADVLP49748 655 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 THOP1P52888 689 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 IRF9Q00978 393 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 GSTM4Q03013 218 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 TTLL9Q3SXZ7 439 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 TMEM207Q6UWW9 146 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 Q6ZSR6 202 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 OTOAQ7RTW8 1153 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 MTERF4Q7Z6M4 381 aaKnown RBP12.5□□□□□ -0.41
C4A-244ENST00000460060 CLEC14AQ86T13 490 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 LRRTM4Q86VH4 590 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 TRAPPC5Q8IUR0 188 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
C4A-244ENST00000460060 ARFGAP2Q8N6H7 521 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 EID2Q8N6I1 236 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 BEND7Q8N7W2 519 aaPredicted RBP12.5□□□□□ -0.41
C4A-244ENST00000460060 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 CD200R1Q8TD46 325 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 ELMO1Q92556 727 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 LINC00615Q96LM1 132 aaPredicted RBP12.5□□□□□ -0.41
C4A-244ENST00000460060 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 SELENOSQ9BQE4 189 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 RMI1Q9H9A7 625 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 AASDHPPTQ9NRN7 309 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 RUVBL2Q9Y230 463 aaKnown RBP12.5□□□□□ -0.41
C4A-244ENST00000460060 DNMT3AQ9Y6K1 912 aaPredicted RBP12.5□□□□□ -0.41
C4A-244ENST00000460060 SCN8AQ9UQD0 1980 aa12.5□□□□□ -0.41
C4A-244ENST00000460060 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 ZNF106Q9H2Y7 1883 aaKnown RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 TMEM120BA0PK00 339 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 RRP8O43159 456 aaKnown RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 GRID2O43424 1007 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 DNAJC6O75061 913 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 GLRA3O75311 464 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 POP7O75817 140 aaKnown RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 KLHL2O95198 593 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 APOA4P06727 396 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 CBSLP0DN79 551 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 ZNF37AP17032 561 aaPredicted RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 NR1D1P20393 614 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 DGKAP23743 735 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 AOAHP28039 575 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 CBSP35520 551 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 GMPRP36959 345 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 RGS4P49798 205 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 SLC18A1P54219 525 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 IL2P60568 153 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 BNIP3Q12983 259 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 MPP2Q14168 576 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 PTK2BQ14289 1009 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 FAM83EQ2M2I3 478 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 TSNAXIP1Q2TAA8 658 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 PLEKHS1Q5SXH7 462 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 HES3Q5TGS1 186 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 AGAP9Q5VTM2 703 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 ENPP7Q6UWV6 458 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 DCP2Q8IU60 420 aaKnown RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 ZNF547Q8IVP9 402 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 CPNE9Q8IYJ1 553 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 CACTIN-AS1Q8N1I8 211 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 PLD6Q8N2A8 252 aaKnown RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 OR13H1Q8NG92 308 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 OR56A4Q8NGH8 313 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 SNIP1Q8TAD8 396 aaKnown RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 KCTD4Q8WVF5 259 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 ANKRD49Q8WVL7 239 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 KLHDC7BQ96G42 594 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 SCARF2Q96GP6 870 aaPredicted RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 UBXN10Q96LJ8 280 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 WDR92Q96MX6 357 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 IQCGQ9H095 443 aaKnown RBP12.49□□□□□ -0.41
C4A-244ENST00000460060 IGSF5Q9NSI5 407 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 ZNHIT2Q9UHR6 403 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 MOSPD1Q9UJG1 213 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 GRID1Q9ULK0 1009 aa12.49□□□□□ -0.41
C4A-244ENST00000460060 C17orf113A0A1B0GUU1 675 aa12.48□□□□□ -0.41
C4A-244ENST00000460060 KLHL33A6NCF5 533 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms