RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 CTRCQ99895 268 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 KIFC1Q9BW19 673 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 SPRY4Q9C004 299 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 KCNF1Q9H3M0 494 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 XAB2Q9HCS7 855 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 SIDT1Q9NXL6 827 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 POLG2Q9UHN1 485 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 RAD1O60671 282 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 NDUFS3O75489 264 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 RPN2P04844 631 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 APOA4P06727 396 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 MLNP12872 115 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 MGAT1P26572 445 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 PREPP48147 710 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 ACY1Q03154 408 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 TMED2Q15363 201 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 PPP1R7Q15435 360 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 RNF187Q5TA31 235 aaPredicted RBP17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 KIAA1614Q5VZ46 1190 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 CASC4Q6P4E1 433 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 XKR5Q6UX68 686 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 RASGRP3Q8IV61 690 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 LILRA3Q8N6C8 439 aaPredicted RBP17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 JPH3Q8WXH2 748 aaPredicted RBP17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 PANX3Q96QZ0 392 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 OR6C1Q96RD1 312 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 TFB2MQ9H5Q4 396 aaKnown RBP17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 TREX1Q9NSU2 369 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 GNPTGQ9UJJ9 305 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 PILRAQ9UKJ1 303 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 ASF1AQ9Y294 204 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 PIKFYVEQ9Y2I7 2098 aa17.06■□□□□ 0.32
SCARNA2-201ENST00000458748 ZNF462Q96JM2 2506 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 PRMT5O14744 637 aaPredicted RBP17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 KPNA5O15131 536 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 KIF1CO43896 1103 aaKnown RBP17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 ZBTB11O95625 1053 aaPredicted RBP17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 MT-ND3P03897 115 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 ITGB2P05107 769 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 CRADDP78560 199 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 HSD11B2P80365 405 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 LY6DQ14210 128 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 MAP7Q14244 749 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 KCNJ11Q14654 390 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 ZNF658BQ4V348 819 aaPredicted RBP17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 PTRHD1Q6GMV3 140 aaKnown RBP17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 TTC27Q6P3X3 843 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 ZNF534Q76KX8 674 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 ZNF605Q86T29 641 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 VASH2Q86V25 355 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 HOOK3Q86VS8 718 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 PPP1R3BQ86XI6 285 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 TBC1D21Q8IYX1 336 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 ESX1Q8N693 406 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 OR4E2Q8NGC2 313 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 COG1Q8WTW3 980 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 PDLIM2Q96JY6 352 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 FCRL4Q96PJ5 515 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 TCF12Q99081 682 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 CARD6Q9BX69 1037 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 ULBP3Q9BZM4 244 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 SEMA4CQ9C0C4 833 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 SEMA5BQ9P283 1151 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 RARRES3Q9UL19 164 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 SOX13Q9UN79 622 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 VPS9D1Q9Y2B5 631 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 TMEM184BQ9Y519 407 aaPredicted RBP17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 PCDHGA4Q9Y5G9 962 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 PRSS21Q9Y6M0 314 aa17.05■□□□□ 0.32
SCARNA2-201ENST00000458748 CFAP46Q8IYW2 2715 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 SDR42E2A6NKP2 422 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 OR1I1O60431 355 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 STK17BO94768 372 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 PLA2G2AP14555 144 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 PDHA2P29803 388 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 SHMT2P34897 504 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 TERF1P54274 439 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 GNG11P61952 73 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 SRSF6Q13247 344 aaKnown RBP17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.04■□□□□ 0.32not detected■□□□□ 11
SCARNA2-201ENST00000458748 DNAJC21Q5F1R6 531 aaKnown RBP17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 AMIGO1Q86WK6 493 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 MCUQ8NE86 351 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 OR52E1Q8NGJ3 308 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 OR8K5Q8NH50 307 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 SLC41A2Q96JW4 573 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 MAP3K3Q99759 626 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 FANCEQ9HB96 536 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 SOHLH2Q9NX45 425 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 SYBUQ9NX95 663 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 MRFAP1Q9Y605 127 aa17.04■□□□□ 0.32
SCARNA2-201ENST00000458748 IGHV5-51A0A0C4DH38 117 aa17.03■□□□□ 0.32
SCARNA2-201ENST00000458748 SLC5A10A0PJK1 596 aa17.03■□□□□ 0.32
SCARNA2-201ENST00000458748 GSAPA4D1B5 854 aa17.03■□□□□ 0.32
SCARNA2-201ENST00000458748 C2orf74A8MZ97 194 aa17.03■□□□□ 0.32
SCARNA2-201ENST00000458748 H3BMM5 538 aa17.03■□□□□ 0.32
SCARNA2-201ENST00000458748 VAPBO95292 243 aa17.03■□□□□ 0.32
SCARNA2-201ENST00000458748 CCNYL3P0C7X3 344 aa17.03■□□□□ 0.32
SCARNA2-201ENST00000458748 FGF5P12034 268 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms