RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 TRIB3Q96RU7 358 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 ZCCHC2Q9C0B9 1178 aaKnown RBP12.78□□□□□ -0.36
SNHG17-208ENST00000456953 KIR3DX1Q9H7L2 352 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 ATP13A2Q9NQ11 1180 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 ANAPC7Q9UJX3 599 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 ITGB1BP2Q9UKP3 347 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 PYCARDQ9ULZ3 195 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 PTRH2Q9Y3E5 179 aaKnown RBP12.78□□□□□ -0.36
SNHG17-208ENST00000456953 CSAG2Q9Y5P2 127 aa12.78□□□□□ -0.36
SNHG17-208ENST00000456953 CFAP20Q9Y6A4 193 aaKnown RBP12.78□□□□□ -0.36
SNHG17-208ENST00000456953 MAP1AP78559 2803 aaPredicted RBP12.78□□□□□ -0.36
SNHG17-208ENST00000456953 ABCA2Q9BZC7 2435 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 A0A0A6YYK5 440 aaPredicted RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 MACROD2A1Z1Q3 448 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 RCCD1A6NED2 376 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 E7EQ34 232 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 MYO1FO00160 1098 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 MATN2O00339 956 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 ZNF749O43361 778 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 HLA-DPA1P20036 260 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 MX2P20592 715 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 ARCN1P48444 511 aaKnown RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 CDC16Q13042 620 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 PRKAA1Q13131 559 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 AIMP2Q13155 320 aaKnown RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 NFE2L1Q14494 772 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 HIF1AQ16665 826 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 CYP2A13Q16696 494 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 METRNLQ641Q3 311 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 NCBP2-AS2Q69YL0 99 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 FCRL6Q6DN72 434 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 SPNS3Q6ZMD2 512 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 BEND7Q8N7W2 519 aaPredicted RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 OR2Y1Q8NGV0 311 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 ITLN2Q8WWU7 325 aaPredicted RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 GBP5Q96PP8 586 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 SLX1AQ9BQ83 275 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 LACRTQ9GZZ8 138 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 IP6K2Q9UHH9 426 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 GPN3Q9UHW5 284 aaPredicted RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 LCMT1Q9UIC8 334 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 DNMT3AQ9Y6K1 912 aaPredicted RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 PCM1Q15154 2024 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 SPG11Q96JI7 2443 aa12.77□□□□□ -0.37
SNHG17-208ENST00000456953 ANKHD1Q8IWZ3 2542 aaKnown RBP12.77□□□□□ -0.37
SNHG17-208ENST00000456953 MYO7BQ6PIF6 2116 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 BTNL10A8MVZ5 291 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 PJA2O43164 708 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 COX6B1P14854 86 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 POLR2CP19387 275 aaPredicted RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 ZNF169Q14929 603 aaPredicted RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 TESK1Q15569 626 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 MLIPQ5VWP3 458 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 DUS1LQ6P1R4 473 aaKnown RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 FAM180AQ6UWF9 173 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 IGFL2Q6UWQ7 119 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 BNC2Q6ZN30 1099 aaPredicted RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 B4GALNT4Q76KP1 1039 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 PPP1R32Q7Z5V6 425 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 PARP9Q8IXQ6 854 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 NXPE1Q8N323 547 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 RASGEF1AQ8N9B8 481 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 DNAJB14Q8TBM8 379 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 FAM71BQ8TC56 605 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 PTERQ96BW5 349 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 C12orf66Q96MD2 445 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 SRPK1Q96SB4 655 aaKnown RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 INSM2Q96T92 566 aaPredicted RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 PITPNM3Q9BZ71 974 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 TRIM8Q9BZR9 551 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
SNHG17-208ENST00000456953 ACSL5Q9ULC5 683 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 GUCA1BQ9UMX6 200 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 DUSP10Q9Y6W6 482 aa12.76□□□□□ -0.37
SNHG17-208ENST00000456953 A0A0U1RQJ8 604 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 AGPSO00116 658 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 CD48P09326 243 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 HTR1EP28566 365 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 DEKP35659 375 aaKnown RBP12.75□□□□□ -0.37
SNHG17-208ENST00000456953 SSR1P43307 286 aaKnown RBP12.75□□□□□ -0.37
SNHG17-208ENST00000456953 CTSCP53634 463 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 OTUD4Q01804 1114 aaKnown RBP12.75□□□□□ -0.37
SNHG17-208ENST00000456953 MESDQ14696 234 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 TCEAL1Q15170 157 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 TLR1Q15399 786 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 ZNF630Q2M218 657 aaPredicted RBP12.75□□□□□ -0.37
SNHG17-208ENST00000456953 LDLRAP1Q5SW96 308 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 ZFYVE27Q5T4F4 411 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 AGAP7PQ5VUJ5 663 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 ZNF662Q6ZS27 426 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 GPR135Q8IZ08 494 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 BCORP1Q8N888 145 aa12.75□□□□□ -0.37
SNHG17-208ENST00000456953 NIPA2Q8N8Q9 360 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms