RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ACSBG2Q5FVE4 666 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 RNF187Q5TA31 235 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 AGAP11Q8TF27 550 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ZNF669Q96BR6 464 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 NUS1Q96E22 293 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ZNF570Q96NI8 536 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 IL21RQ9HBE5 538 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 FGF22Q9HCT0 170 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ASIC5Q9NY37 505 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 CD300AQ9UGN4 299 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 CA14Q9ULX7 337 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PCDHB1Q9Y5F3 818 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 FAM95CA0A1B0GW59 222 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 TCRBV21S2A2A0A5A6 115 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 IQCF5A8MTL0 148 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 CDX4O14627 284 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 HYAL3O43820 417 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 HNRNPCL1O60812 293 aaKnown RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 MMP20O60882 483 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 NIPSNAP2O75323 286 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 NME1P15531 152 aaKnown RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 DESP17661 470 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 XRCC1P18887 633 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 UGT1A6P19224 532 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 UGT1A1P22309 533 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 UGT1A4P22310 534 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PDHA2P29803 388 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 CD6P30203 668 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 UGT1A3P35503 534 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 UGT1A5P35504 534 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SEC13P55735 322 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SESN2P58004 480 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 YBX1P67809 324 aaKnown RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 RAE1P78406 368 aaKnown RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 LSM11P83369 360 aaKnown RBP eCLIP4.84□□□□□ -1.63
RIF1-207ENST00000454583 RPA4Q13156 261 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SP140Q13342 867 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 LRRC32Q14392 662 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PCSK7Q16549 785 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PROX2Q3B8N5 592 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ADPRMQ3LIE5 342 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 TAF1BQ53T94 588 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 FRMD7Q6ZUT3 714 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 USP45Q70EL2 814 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 TMPRSS9Q7Z410 1059 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 KBTBD6Q86V97 674 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 TMPRSS6Q8IU80 811 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SFTPA2Q8IWL1 248 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SLC25A45Q8N413 288 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 FSTL5Q8N475 847 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 L3MBTL4Q8NA19 623 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ZSCAN1Q8NBB4 408 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 EEF1AKMT1Q8WVE0 214 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 KLHL6Q8WZ60 621 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 OR1E3Q8WZA6 343 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 BHMTQ93088 406 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 APOOQ9BUR5 198 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 TBC1D10AQ9BXI6 508 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SLC17A9Q9BYT1 436 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 TCEAL2Q9H3H9 227 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 RABEP2Q9H5N1 569 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 DENND2DQ9H6A0 471 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 DMTF1Q9Y222 760 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ATMQ13315 3056 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 C1orf232A0A0U1RR37 186 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 A8MT66 165 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 PRR33A8MZF0 331 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 GOLGA8TH3BQL2 631 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 IFNB1P01574 187 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 PTPN4P29074 926 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 PI4KAP42356 2102 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 FRKP42685 505 aaPredicted RBP4.84□□□□□ -1.64
RIF1-207ENST00000454583 NSG1P42857 185 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 SERPINB8P50452 374 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 INAVAQ3KP66 663 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 WASHC2DQ5SRD0 308 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 LDLRAP1Q5SW96 308 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 N4BP2L1Q5TBK1 243 aaPredicted RBP4.84□□□□□ -1.64
RIF1-207ENST00000454583 CDCP2Q5VXM1 449 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 ZNF425Q6IV72 752 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 LRRC8EQ6NSJ5 796 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 PAQR3Q6TCH7 311 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.644e-10■□□□□ 9.7
RIF1-207ENST00000454583 STRA8Q7Z7C7 330 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 LAS2Q8IYD9 372 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 AFAP1L2Q8N4X5 818 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 SLC25A41Q8N5S1 370 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 FAM181AQ8N9Y4 354 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 DTWD2Q8NBA8 298 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 SIDT2Q8NBJ9 832 aaKnown RBP4.84□□□□□ -1.64
RIF1-207ENST00000454583 SAP25Q8TEE9 199 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 WDR60Q8WVS4 1066 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 HIC2Q96JB3 615 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 CABS1Q96KC9 395 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 PANX3Q96QZ0 392 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 NTMT1Q9BV86 223 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 FAM96AQ9H5X1 160 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 KIR3DX1Q9H7L2 352 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 RAD18Q9NS91 495 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 KCTD5Q9NXV2 234 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms