RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 KPNA2P52292 529 aaKnown RBP12.54□□□□□ -0.4
CHD3-206ENST00000452447 NFKB2Q00653 900 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 SNX1Q13596 522 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 ERV3-1Q14264 604 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 ITIH4Q14624 930 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
CHD3-206ENST00000452447 DBN1Q16643 649 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 CERS6Q6ZMG9 384 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 ATG14Q6ZNE5 492 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 C1orf54Q8WWF1 131 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 ANP32BQ92688 251 aaKnown RBP12.54□□□□□ -0.4
CHD3-206ENST00000452447 MVB12BQ9H7P6 319 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 LHX9Q9NQ69 397 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 RAB6BQ9NRW1 208 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 C1GALT1Q9NS00 363 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 HEATR9A2RTY3 570 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 FTH1P02794 183 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 NTRK1P04629 796 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 PREPP48147 710 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 DNASE1L3Q13609 305 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 ATP1A1-AS1Q5TC04 95 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 TMEM126BQ8IUX1 230 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 PHC3Q8NDX5 983 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 OR8K5Q8NH50 307 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 ELMO1Q92556 727 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 TFGQ92734 400 aaPredicted RBP12.53□□□□□ -0.4
CHD3-206ENST00000452447 TFB2MQ9H5Q4 396 aaKnown RBP12.53□□□□□ -0.4
CHD3-206ENST00000452447 FANCEQ9HB96 536 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 KCND1Q9NSA2 647 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 POMT2Q9UKY4 750 aa12.53□□□□□ -0.4
CHD3-206ENST00000452447 ASH1LQ9NR48 2969 aaKnown RBP12.52□□□□□ -0.4
CHD3-206ENST00000452447 PIPSLA2A3N6 862 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 CCDC162PA2VCL2 907 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 OR51F1A6NGY5 319 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 SLC9B1P1A6NJY1 282 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 C21orf140B9A014 251 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 F8W8V4 182 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 PYCARD-AS1I3L0S3 204 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 LIN7AO14910 233 aaPredicted RBP12.52□□□□□ -0.4
CHD3-206ENST00000452447 CPNE3O75131 537 aaKnown RBP12.52□□□□□ -0.4
CHD3-206ENST00000452447 SCRG1O75711 98 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 SUN1O94901 812 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 APRTP07741 180 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 OR56A5P0C7T3 313 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 ADRA1DP25100 572 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 PSMA3P25788 255 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 DEKP35659 375 aaKnown RBP12.52□□□□□ -0.4
CHD3-206ENST00000452447 PRKG2Q13237 762 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 GPR19Q15760 415 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 ZNF658BQ4V348 819 aaPredicted RBP12.52□□□□□ -0.4
CHD3-206ENST00000452447 MEI1Q5TIA1 1274 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 LYPLAL1Q5VWZ2 237 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 FBXO38Q6PIJ6 1188 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 PACS1Q6VY07 963 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 MICALCLQ6ZW33 695 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 NLRP9Q7RTR0 991 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 AMIGO1Q86WK6 493 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 OR52E1Q8NGJ3 308 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 C9orf43Q8TAL5 461 aaPredicted RBP12.52□□□□□ -0.4
CHD3-206ENST00000452447 HDAC10Q969S8 669 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 PPM1MQ96MI6 270 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 PAK5Q9P286 719 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 POLHQ9Y253 713 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 BTRCQ9Y297 605 aa12.52□□□□□ -0.4
CHD3-206ENST00000452447 SNRNP200O75643 2136 aaKnown RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 BTN3A1O00481 513 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 TERTO14746 1132 aaKnown RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 SUV39H1O43463 412 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 CREG1O75629 220 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 CCDC175P0C221 793 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 ETS1P14921 441 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 PRDX3P30048 256 aaKnown RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 FOXN2P32314 431 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 PPARGP37231 505 aaPredicted RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 GRIA1P42261 906 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 PRAMEP78395 509 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 PLOD1Q02809 727 aaPredicted RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 KCNC4Q03721 635 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 SEMA5AQ13591 1074 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 BRD3Q15059 726 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 SYTL3Q4VX76 610 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 TSTD2Q5T7W7 516 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 AFTPHQ6ULP2 937 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 HOOK3Q86VS8 718 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 PTRH1Q86Y79 214 aaKnown RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 OR13J1Q8NGT2 312 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 CT55Q8WUE5 264 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 ZNF501Q96CX3 271 aaPredicted RBP12.52□□□□□ -0.41
CHD3-206ENST00000452447 RANBP9Q96S59 729 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 HGH1Q9BTY7 390 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 TLR10Q9BXR5 811 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 GPR87Q9BY21 358 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 TWSG1Q9GZX9 223 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 ANAPC5Q9UJX4 755 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 RIMKLBQ9ULI2 386 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 ASF1AQ9Y294 204 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms