RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 MATN2O00339 956 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 QSOX1O00391 747 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 IFRD1O00458 451 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-208ENST00000452047 LIN7AO14910 233 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-208ENST00000452047 MT-ND3P03897 115 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 FURINP09958 794 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 SPTBP11277 2137 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 TCN2P20062 427 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 CCR10P46092 362 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 TUBB4BP68371 445 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 NFKB2Q00653 900 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 KRT33BQ14525 404 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 TSTD2Q5T7W7 516 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 DRICH1Q6PGQ1 229 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-208ENST00000452047 FBXO38Q6PIJ6 1188 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF534Q76KX8 674 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 OR52E1Q8NGJ3 308 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 LCN9Q8WX39 176 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 HDAC10Q969S8 669 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF501Q96CX3 271 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-208ENST00000452047 ALS2CR12Q96Q35 445 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 FERD3LQ96RJ6 166 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 HGH1Q9BTY7 390 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 PITPNM3Q9BZ71 974 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 FAM117AQ9C073 453 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
CPSF4-208ENST00000452047 MVB12BQ9H7P6 319 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 AKIRIN1Q9H9L7 192 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-208ENST00000452047 LHX9Q9NQ69 397 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 C1GALT1Q9NS00 363 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 PAK5Q9P286 719 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 PADI1Q9ULC6 663 aa12.12□□□□□ -0.47
CPSF4-208ENST00000452047 E7EVH7 732 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 BTN3A3O00478 584 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 BTN3A1O00481 513 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 SUV39H1O43463 412 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 OR1I1O60431 355 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 GOT2P00505 430 aaKnown RBP12.11□□□□□ -0.47
CPSF4-208ENST00000452047 FTH1P02794 183 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 NTRK1P04629 796 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 APRTP07741 180 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 CCDC175P0C221 793 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 CCNYL3P0C7X3 344 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 MSL3P1P0C860 447 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 ZSCAN5DPP0CG00 497 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 ADRA1DP25100 572 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 ACADLP28330 430 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 RPL22P35268 128 aaKnown RBP12.11□□□□□ -0.47
CPSF4-208ENST00000452047 ARL4DP49703 201 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 PRKAA1Q13131 559 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 DNASE1L3Q13609 305 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 LAMB3Q13751 1172 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 GPR19Q15760 415 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 CCNG2Q16589 344 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 DEFB109BQ30KR1 87 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 C16orf46Q6P387 395 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 AFTPHQ6ULP2 937 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 PPP1R21Q6ZMI0 780 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF517Q6ZMY9 492 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-208ENST00000452047 PRICKLE2Q7Z3G6 844 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 CCDC89Q8N998 374 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 OR8K5Q8NH50 307 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 CT55Q8WUE5 264 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 APOBEC4Q8WW27 367 aaKnown RBP12.11□□□□□ -0.47
CPSF4-208ENST00000452047 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-208ENST00000452047 PEX13Q92968 403 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 SGSM3Q96HU1 749 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 LZTFL1Q9NQ48 299 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 LATS2Q9NRM7 1088 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 KCND3Q9UK17 655 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 TCAF1Q9Y4C2 921 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 HEMK1Q9Y5R4 338 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-208ENST00000452047 FLNCQ14315 2725 aa12.11□□□□□ -0.47
CPSF4-208ENST00000452047 SNRNP200O75643 2136 aaKnown RBP12.11□□□□□ -0.47
CPSF4-208ENST00000452047 SLC5A10A0PJK1 596 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 GSAPA4D1B5 854 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 SLC9B1P1A6NJY1 282 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 C21orf140B9A014 251 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 BHMG1C9JSJ3 638 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-208ENST00000452047 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 CPNE3O75131 537 aaKnown RBP12.1□□□□□ -0.47
CPSF4-208ENST00000452047 SCRG1O75711 98 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 GAS8O95995 478 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 ST6GAL1P15907 406 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 CDH3P22223 829 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 PRDX3P30048 256 aaKnown RBP12.1□□□□□ -0.47
CPSF4-208ENST00000452047 LMAN1P49257 510 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 CCZ1BP86790 482 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 CCZ1P86791 482 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-208ENST00000452047 ABRQ12979 859 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 PRKG2Q13237 762 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 SEMA3AQ14563 771 aa12.1□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF789Q5FWF6 425 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms