RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 ERVH48-1M5A8F1 160 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MTSS1O43312 755 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 RGS10O43665 173 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 PRSS23O95084 383 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MED26O95402 600 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 FHP07954 510 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 RAP2AP10114 183 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 UQCRC1P31930 480 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MATKP42679 507 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 INCA1Q0VD86 236 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 SLAMF1Q13291 335 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MORN1Q5T089 497 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 LAIR1Q6GTX8 287 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TRNT1Q96Q11 434 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 VPS35Q96QK1 796 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 C3orf18Q9UK00 162 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 USP3Q9Y6I4 520 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MAU2Q9Y6X3 613 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MYADML2A6NDP7 307 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TBKBP1A7MCY6 615 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 A8MX80 341 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 UPK1AO00322 258 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 KMOO15229 486 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 IMPDH1P20839 514 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 IGFBP5P24593 272 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TAF6P49848 677 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 SNX16P57768 344 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 CCDC85BQ15834 202 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 PRSS36Q5K4E3 855 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 CCSAPQ6IQ19 270 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 RASAL3Q86YV0 1011 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ATG16L2Q8NAA4 619 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TRIB2Q92519 343 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 SNAPC3Q92966 411 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 VMP1Q96GC9 406 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ZFP14Q9HCL3 533 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 RBM22Q9NW64 420 aaKnown RBP eCLIP11.85□□□□□ -0.511e-7■■■■□ 20.6
RAB11FIP3-205ENST00000450428 ZMYM5Q9UJ78 669 aa11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 LEF1Q9UJU2 399 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TNFRSF21O75509 655 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TSPAN9O75954 239 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ALX3O95076 343 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 PCMT1P22061 227 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 LIPAP38571 399 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 HADHAP40939 763 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ISL1P61371 349 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 CRHR2Q13324 411 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 PAN2Q504Q3 1202 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 CES5AQ6NT32 575 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 BEND5Q7L4P6 421 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 NECAB2Q7Z6G3 386 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ANKRD46Q86W74 232 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 OR2T12Q8NG77 320 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 PHOX2BQ99453 314 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TMEM39AQ9NV64 488 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TAS2R9Q9NYW1 312 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 STMN3Q9NZ72 180 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MARCH4Q9P2E8 410 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TPRKBQ9Y3C4 175 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 SCN1AP35498 2009 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 AGAP5A6NIR3 686 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 VIPP01282 170 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 SLC10A3P09131 477 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 USP17L7P0C7H9 530 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 AKR1A1P14550 325 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ATF4P18848 351 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 PAMP19021 973 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 KRT6CP48668 564 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 RAB25P57735 213 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ALDH6A1Q02252 535 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MVKQ03426 396 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 SOX4Q06945 474 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 BST2Q10589 180 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 Q5BKY6 102 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 C8orf82Q6P1X6 216 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 PAMR1Q6UXH9 720 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 GIPC2Q8TF65 315 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 LPPQ93052 612 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 C12orf4Q9NQ89 552 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 NSMCE4AQ9NXX6 385 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 TAS2R16Q9NYV7 291 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 CDH9Q9ULB4 789 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 POLR3HQ9Y535 204 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MEIS3P2A8K0S8 358 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 E5RI56 91 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 MXD1Q05195 221 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 NR6A1Q15406 480 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 ZNF544Q6NX49 715 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 HACD2Q6Y1H2 254 aa11.84□□□□□ -0.51
RAB11FIP3-205ENST00000450428 CYP4Z1Q86W10 505 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms