RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 EIF3CQ99613 913 aaKnown RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 ZSCAN5AQ9BUG6 496 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 NDST4Q9H3R1 872 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 IMP3Q9NV31 184 aaKnown RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 DNAJB12Q9NXW2 375 aaKnown RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 SLC24A2Q9UI40 661 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 POMT2Q9UKY4 750 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 AP4E1Q9UPM8 1137 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 CFAP20Q9Y6A4 193 aaKnown RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 A0A1B0GTH6 734 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 GSAPA4D1B5 854 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 ANKRD62A6NC57 917 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 MATN2O00339 956 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 OR2B3O76000 313 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 HEXAP06865 529 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 ST6GAL1P15907 406 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 RPL26P61254 145 aaKnown RBP12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 ALS2CLQ60I27 953 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 PDPK2PQ6A1A2 396 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 AMZ2Q86W34 360 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 RNF214Q8ND24 703 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 OR4E2Q8NGC2 313 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 PHF10Q8WUB8 498 aaKnown RBP12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 SLC20A1Q8WUM9 679 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 ALPK1Q96QP1 1244 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 CNPY3Q9BT09 278 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 SPRTNQ9H040 489 aaPredicted RBP12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 LIME1Q9H400 295 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 NT5MQ9NPB1 228 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 TXLNGQ9NUQ3 528 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 DHCR7Q9UBM7 475 aaKnown RBP12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 RPL26L1Q9UNX3 145 aaKnown RBP12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 MRPS2Q9Y399 296 aaKnown RBP12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 HS3ST3B1Q9Y662 390 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 GTF3C1Q12789 2109 aa12.14□□□□□ -0.47
AC004540.1-204ENST00000449537 FBN1P35555 2871 aaKnown RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 FAM171A2A8MVW0 826 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 MAFKO60675 156 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 POP7O75817 140 aaKnown RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 SLCO2B1O94956 709 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 PRLP01236 227 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 HLA-DPA1P20036 260 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 PRDX3P30048 256 aaKnown RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 DGKQP52824 942 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 TMEM115Q12893 351 aaPredicted RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 MYBPHQ13203 477 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 GTF2H3Q13889 308 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 CA9Q16790 459 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 KRTCAP3Q53RY4 240 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 CDHR3Q6ZTQ4 885 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 TRAM1L1Q8N609 369 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 GPR26Q8NDV2 337 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 LPCAT1Q8NF37 534 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 SUN3Q8TAQ9 357 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 CCDC110Q8TBZ0 833 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 THAP3Q8WTV1 239 aaPredicted RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 INSM2Q96T92 566 aaPredicted RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 NUP85Q9BW27 656 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 VPS16Q9H269 839 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 MRM3Q9HC36 420 aaKnown RBP12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 ADAM22Q9P0K1 906 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 PTGFRNQ9P2B2 879 aa12.13□□□□□ -0.47
AC004540.1-204ENST00000449537 E9PLN8 166 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 PROM1O43490 865 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 USP1O94782 785 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 MLYCDO95822 493 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 F10P00742 488 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 DESP17661 470 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 CA4P22748 312 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 CES1P23141 567 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 PCSK6P29122 969 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 HCAR3P49019 387 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 CDH6P55285 790 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 UBASH3AP57075 661 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 FANCCQ00597 558 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 PTP4A2Q12974 167 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 RBBP7Q16576 425 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 KHDC1Q4VXA5 237 aaKnown RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 PPP6R3Q5H9R7 873 aaPredicted RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 APTXQ7Z2E3 356 aaKnown RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 ZNF677Q86XU0 584 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 EID3Q8N140 333 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 OR11G2Q8NGC1 345 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 AGAP11Q8TF27 550 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 TTC25Q96NG3 672 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 ERGIC2Q96RQ1 377 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 KCTD15Q96SI1 283 aaPredicted RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 VKORC1Q9BQB6 163 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 TDRD1Q9BXT4 1180 aaKnown RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 POLDIP3Q9BY77 421 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms