RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 PHC3Q8NDX5 983 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 C12orf66Q96MD2 445 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 SYTL2Q9HCH5 934 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 ACOT9Q9Y305 439 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 RP1P56715 2156 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 A0A087X1B8 175 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 PRAMEF33A0A0G2JMD5 474 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 NEMP2A6NFY4 417 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 MYZAPP0CAP1 466 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 MPC1LP0DKB6 136 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 F3P13726 295 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 ENO3P13929 434 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 ACADLP28330 430 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 ATP5DP30049 168 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 PLOD1Q02809 727 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 RPE65Q16518 533 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 ABRAXAS1Q6UWZ7 409 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 WASH2PQ6VEQ5 465 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 CROCCP2Q86T23 111 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 TBC1D1Q86TI0 1168 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 SRRM1Q8IYB3 904 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 CENPLQ8N0S6 344 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 NAGSQ8N159 534 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 C4orf33Q8N1A6 199 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 MYO1HQ8N1T3 1032 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 PLD6Q8N2A8 252 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 SDR16C5Q8N3Y7 309 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 NXNL1Q96CM4 212 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 TMBIM4Q9HC24 238 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 TMEM9BQ9NQ34 198 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 WASH6PQ9NQA3 447 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 IGSF5Q9NSI5 407 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 IMP3Q9NV31 184 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 DNAAF2Q9NVR5 837 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 ZNF358Q9NW07 568 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 ZNF624Q9P2J8 865 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 PCOLCE2Q9UKZ9 415 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 ASXL3Q9C0F0 2248 aa17.57■□□□□ 0.4
TRAPPC4-203ENST00000447216 PCM1Q15154 2024 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 NPEPPSL1A6NEC2 478 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 EIF3FO00303 357 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 CDC7O00311 574 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 IFRD1O00458 451 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 TRIM38O00635 465 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 GDF9O60383 454 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 NOBOXO60393 691 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 ZNF883P0CG24 379 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 MYF5P13349 255 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 SLC19A1P41440 591 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 HALP42357 657 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 BDKRB1P46663 353 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 MAZP56270 477 aaKnown RBP17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 IYDQ6PHW0 289 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 LVRNQ6Q4G3 990 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 NEK10Q6ZWH5 1172 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 EID2Q8N6I1 236 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 KYQ8NBH2 561 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 SLC37A2Q8TED4 501 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 TFGQ92734 400 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 ARL8AQ96BM9 186 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 UBXN10Q96LJ8 280 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 DERL2Q9GZP9 239 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 ADAMTS6Q9UKP5 1117 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 BTBD3Q9Y2F9 522 aa17.56■□□□□ 0.4
TRAPPC4-203ENST00000447216 KRT87PA6NCN2 255 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 GOLGA6L10A6NI86 522 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 ZBTB14O43829 449 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 PCDHGA12O60330 932 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 LTA4HP09960 611 aaKnown RBP17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 MTHFD1P11586 935 aaKnown RBP17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 CD1DP15813 335 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 CREB1P16220 341 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 KRT4P19013 534 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 CCNFP41002 786 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 GLRBP48167 497 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 C6orf132Q5T0Z8 1188 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 SH2D5Q6ZV89 423 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 CLEC14AQ86T13 490 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 OR5AR1Q8NGP9 310 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 OR4C6Q8NH72 309 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 ACMSDQ8TDX5 336 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 CXorf40BQ96DE9 158 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 PGM2Q96G03 612 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 PDLIM5Q96HC4 596 aaKnown RBP17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 FERD3LQ96RJ6 166 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 NLGN3Q9NZ94 848 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 CIDEBQ9UHD4 219 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 ASF1AQ9Y294 204 aa17.55■□□□□ 0.4
TRAPPC4-203ENST00000447216 C4orf47A7E2U8 309 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 BTN3A1O00481 513 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 SIGLEC6O43699 453 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 KLHL2O95198 593 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 MATN4O95460 622 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 ALPPL2P10696 532 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 PRKG2Q13237 762 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 TSNQ15631 228 aaKnown RBP17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 CCSMST1Q4G0I0 132 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 TNFAIP8L3Q5GJ75 292 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 LRRC8EQ6NSJ5 796 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms