RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 OPA3Q9H6K4 179 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 EQTNQ9NQ60 294 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 FAM212BQ9NTI7 297 aaPredicted RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 CATSPERZQ9NTU4 200 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 TDP1Q9NUW8 608 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 SPHK1Q9NYA1 384 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 NDUFAF4Q9P032 175 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 CDH22Q9UJ99 828 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 MAN1B1Q9UKM7 699 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 MGAT4BQ9UQ53 548 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 STARD10Q9Y365 291 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PCDHAC2Q9Y5I4 1007 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ALG5Q9Y673 324 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 RNF215Q9Y6U7 377 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 MYH4Q9Y623 1939 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 USP32Q8NFA0 1604 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 CCDC182A6NF36 153 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 FAM205CA6NFA0 338 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 MROH6A6NGR9 719 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 SMAD9O15198 467 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 HSPA12AO43301 675 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 HRO43593 1189 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 GPRIN2O60269 458 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 XYLBO75191 536 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 RPP14O95059 124 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ACSM4P0C7M7 580 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 SLC2A1P11166 492 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ACVR2AP27037 513 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 EEF1DP29692 281 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 EPHX2P34913 555 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 METAP1P53582 386 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 STARD6P59095 220 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ACTR2P61160 394 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ARF5P84085 180 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 MBTD1Q05BQ5 628 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 GK3PQ14409 553 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 TRIM61Q5EBN2 209 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 LDLRAP1Q5SW96 308 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 STRIP1Q5VSL9 837 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 C11orf63Q6NUN7 778 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 KCNT2Q6UVM3 1135 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 COMMD7Q86VX2 200 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 THNSL2Q86YJ6 484 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 CCDC103Q8IW40 242 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ABRAQ8N0Z2 381 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PARP8Q8N3A8 854 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 MFSD4AQ8N468 514 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PLPP7Q8NBV4 271 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PNMA1Q8ND90 353 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 BBS1Q8NFJ9 593 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 WFIKKN2Q8TEU8 576 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 TMEM40Q8WWA1 233 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ZBED3Q96IU2 234 aaPredicted RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ZNF512Q96ME7 567 aaPredicted RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ATP6V0BQ99437 205 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 NEUROG2Q9H2A3 272 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 GAL3ST2Q9H3Q3 398 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 RNPEPQ9H4A4 650 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 FBRSL1Q9HCM7 1045 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PRDM7Q9NQW5 492 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 SNX15Q9NRS6 342 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PNPLA3Q9NST1 481 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 AGPAT5Q9NUQ2 364 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 BFARQ9NZS9 450 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 TBC1D29Q9UFV1 150 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 A0A0B4J293 547 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 MEIOCA2RUB1 952 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 FOXO3O43524 673 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 NUDT21O43809 227 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 SOX30O94993 753 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 STARD3NLO95772 234 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 DLGAP3O95886 979 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 SERPINA6P08185 405 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 CYP2D6P10635 497 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 MUC1P15941 1255 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 NFKB2Q00653 900 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 TFCP2Q12800 502 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 TAB1Q15750 504 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 TOMM34Q15785 309 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 KIF19Q2TAC6 998 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 GPR107Q5VW38 600 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 VSTM1Q6UX27 236 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 PIWIL3Q7Z3Z3 882 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 GALNT10Q86SR1 603 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 TRIM69Q86WT6 500 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 NUDT13Q86X67 352 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 SVOPLQ8N434 492 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 OR9A2Q8NGT5 310 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 RNF31Q96EP0 1072 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 UHRF1Q96T88 793 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 LACRTQ9GZZ8 138 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 ANKRD19PQ9H560 264 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 EFCAB1Q9HAE3 211 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 FBXO8Q9NRD0 319 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 FAM207AQ9NSI2 230 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 TMEM59LQ9UK28 342 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 KLHL20Q9Y2M5 609 aa8.52□□□□□ -1.05
MCF2L2-203ENST00000447025 CIB4A0PJX0 185 aa8.51□□□□□ -1.05
MCF2L2-203ENST00000447025 M0QYV0 167 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms