RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ICKQ9UPZ9 632 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 RPS6KL1Q9Y6S9 549 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 UBA6A0AVT1 1052 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 SLC5A10A0PJK1 596 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 HEATR9A2RTY3 570 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 KLHL33A6NCF5 533 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ZNF891A8MT65 544 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 IQCF5A8MTL0 148 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 BHMG1C9JSJ3 638 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 CEP104O60308 925 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 AP2A2O94973 939 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 NTRK1P04629 796 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 PVRP15151 417 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ADRA1DP25100 572 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ARNTP27540 789 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 NSG1P42857 185 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 LMAN1P49257 510 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 TERF1P54274 439 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 SESN2P58004 480 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 NFATC3Q12968 1075 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ABRQ12979 859 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 PRKG2Q13237 762 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ITIH4Q14624 930 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 IL11RAQ14626 422 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 SKIDA1Q1XH10 827 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 LCN10Q6JVE6 187 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 TTC27Q6P3X3 843 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 FAM199XQ6PEV8 388 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 C6orf15Q6UXA7 325 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 TMEM135Q86UB9 458 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 PPP1R3BQ86XI6 285 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ADGRF3Q8IZF5 1079 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ESX1Q8N693 406 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 CCDC89Q8N998 374 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 LMNTD1Q8N9Z9 388 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ZSCAN1Q8NBB4 408 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 SLC38A9Q8NBW4 561 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 CT55Q8WUE5 264 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ZFPM2Q8WW38 1151 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 STARD8Q92502 1023 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ELMO1Q92556 727 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 TFGQ92734 400 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ZNF501Q96CX3 271 aaPredicted RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 MS4A14Q96JA4 679 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 CD180Q99467 661 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 TRIM56Q9BRZ2 755 aaKnown RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 KLHL25Q9H0H3 589 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 CHRAC1Q9NRG0 131 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 FGF21Q9NSA1 209 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 STARD5Q9NSY2 213 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 LNPEPQ9UIQ6 1025 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 PLAGL1Q9UM63 463 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 CDYLQ9Y232 598 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 DRG1Q9Y295 367 aaKnown RBP10.56□□□□□ -0.72
SF3A1-203ENST00000444440 ZKSCAN5Q9Y2L8 839 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 DOCK10Q96BY6 2186 aa10.56□□□□□ -0.72
SF3A1-203ENST00000444440 GSAPA4D1B5 854 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 SLC9B1P1A6NJY1 282 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 B8ZZF3 427 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 E7EVH7 732 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 HCRTR1O43613 425 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 ST6GAL1P15907 406 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 NDUFS1P28331 727 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 NMBRP28336 390 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 PRDX3P30048 256 aaKnown RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 PEBP1P30086 187 aaKnown RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 CCR7P32248 378 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 DLSTP36957 453 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 CD151P48509 253 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 CSE1LP55060 971 aaKnown RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 RPS18P62269 152 aaKnown RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 BASP1P80723 227 aaKnown RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 RPA4Q13156 261 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 LAMB3Q13751 1172 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 TRIP13Q15645 432 aaPredicted RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 ZNF789Q5FWF6 425 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 ANKRD22Q5VYY1 191 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 C16orf46Q6P387 395 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 KLHL35Q6PF15 583 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 AFTPHQ6ULP2 937 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 CES3Q6UWW8 571 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 ZNF605Q86T29 641 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 TRIM73Q86UV7 250 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 REXO1L1PQ8IX06 675 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 KRT222Q8N1A0 295 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 OR4L1Q8NH43 312 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 FLVCR1-AS1Q8TAF5 88 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 LCN9Q8WX39 176 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 STAMBPL1Q96FJ0 436 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 ARHGAP9Q9BRR9 750 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 TWSG1Q9GZX9 223 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 KCNF1Q9H3M0 494 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 SRMSQ9H3Y6 488 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 TFB2MQ9H5Q4 396 aaKnown RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 EIF2B3Q9NR50 452 aaKnown RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 TREX1Q9NSU2 369 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 SYBUQ9NX95 663 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms