RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 A8MX80 341 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 TULP3O75386 442 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 SEC24DO94855 1032 aaPredicted RBP15.7■□□□□ 0.1
SHQ1-202ENST00000444040 KCNH1O95259 989 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 SNAP29O95721 258 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 GNRH1P01148 92 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 ADARB1P78563 741 aaKnown RBP15.7■□□□□ 0.1
SHQ1-202ENST00000444040 PLIN5Q00G26 463 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 HMGCS1Q01581 520 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 DGKKQ5KSL6 1271 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 METTL2BQ6P1Q9 378 aaKnown RBP15.7■□□□□ 0.1
SHQ1-202ENST00000444040 LPCAT2Q7L5N7 544 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 GPR26Q8NDV2 337 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 TTC16Q8NEE8 873 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 AUTS2Q8WXX7 1259 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 VPS50Q96JG6 964 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 LYSMD1Q96S90 227 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 ABCB8Q9NUT2 735 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 TRPS1Q9UHF7 1281 aa15.7■□□□□ 0.1
SHQ1-202ENST00000444040 EIF3LQ9Y262 564 aaKnown RBP15.7■□□□□ 0.1
SHQ1-202ENST00000444040 ZNF106Q9H2Y7 1883 aaKnown RBP15.7■□□□□ 0.1
SHQ1-202ENST00000444040 LOC730098B7Z3J9 87 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 SLC28A1O00337 649 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 WDR47O94967 919 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 ANXA6P08133 673 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 EBLN1P0CF75 366 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 GRAMD4Q6IC98 578 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 GALNT13Q8IUC8 556 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 OFCC1Q8IZS5 231 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 TMEM169Q96HH4 297 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 CCDC115Q96NT0 180 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 HERC2P3Q9BVR0 1158 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 SOX17Q9H6I2 414 aaPredicted RBP15.69■□□□□ 0.1
SHQ1-202ENST00000444040 ATP13A3Q9H7F0 1226 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 KLQ9UEF7 1012 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 INTS6Q9UL03 887 aaKnown RBP15.69■□□□□ 0.1
SHQ1-202ENST00000444040 NPIPB15A6NHN6 443 aaPredicted RBP15.69■□□□□ 0.1
SHQ1-202ENST00000444040 H0Y858 1186 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 ULK1O75385 1050 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 CD70P32970 193 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 GNPDA1P46926 289 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 MAD2L1Q13257 205 aaPredicted RBP15.69■□□□□ 0.1
SHQ1-202ENST00000444040 ABRAXAS1Q6UWZ7 409 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 MBOAT1Q6ZNC8 495 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 ERI1Q8IV48 349 aaKnown RBP15.69■□□□□ 0.1
SHQ1-202ENST00000444040 RGL4Q8IZJ4 473 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 USP7Q93009 1102 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 GORASP2Q9H8Y8 452 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 TLR9Q9NR96 1032 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 ASIC5Q9NY37 505 aa15.69■□□□□ 0.1
SHQ1-202ENST00000444040 ZNF490Q9ULM2 529 aaPredicted RBP15.69■□□□□ 0.1
SHQ1-202ENST00000444040 RAP2AP10114 183 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 PLEKHG6Q3KR16 790 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 FAM174BQ3ZCQ3 159 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 SPOUT1Q5T280 376 aaKnown RBP15.68■□□□□ 0.1
SHQ1-202ENST00000444040 CRTC1Q6UUV9 634 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 SUSD1Q6UWL2 747 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 HTR3DQ70Z44 454 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 BBS7Q8IWZ6 715 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 MSRB3Q8IXL7 192 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 ITFG1Q8TB96 612 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 DTNBP1Q96EV8 351 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 IKZF5Q9H5V7 419 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 PCDHGA11Q9Y5H2 935 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 MICAL3Q7RTP6 2002 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 MANBAO00462 879 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 IGSF6O95976 241 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 CHRM1P11229 460 aaPredicted RBP15.68■□□□□ 0.1
SHQ1-202ENST00000444040 EPB42P16452 691 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 EPORP19235 508 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 CYP4F8P98187 520 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 SEMG2Q02383 582 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 SPANXN4Q5MJ08 99 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 MPP7Q5T2T1 576 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 TMEM214Q6NUQ4 689 aaKnown RBP15.68■□□□□ 0.1
SHQ1-202ENST00000444040 GAREM2Q75VX8 874 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 CPXM2Q8N436 756 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 LIX1Q8N485 282 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 AADATQ8N5Z0 425 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 PAF1Q8N7H5 531 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 GLB1L3Q8NCI6 653 aaPredicted RBP15.68■□□□□ 0.1
SHQ1-202ENST00000444040 ZNF548Q8NEK5 533 aaPredicted RBP15.68■□□□□ 0.1
SHQ1-202ENST00000444040 OR2AP1Q8NGE2 309 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 ZBTB18Q99592 522 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 CARS2Q9HA77 564 aaKnown RBP15.68■□□□□ 0.1
SHQ1-202ENST00000444040 ZFP14Q9HCL3 533 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 SLC25A37Q9NYZ2 338 aa15.68■□□□□ 0.1
SHQ1-202ENST00000444040 KIAA1522Q9P206 1035 aaPredicted RBP15.68■□□□□ 0.1
SHQ1-202ENST00000444040 ANKRD33BA6NCL7 494 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 SERPINA4P29622 427 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 AKT1P31749 480 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 NSG1P42857 185 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 MAPKAPK3Q16644 382 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 ZBED5Q49AG3 693 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 LEMD2Q8NC56 503 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 OR2T12Q8NG77 320 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 FIBINQ8TAL6 211 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 VWCEQ96DN2 955 aa15.67■□□□□ 0.1
SHQ1-202ENST00000444040 ZNF558Q96NG5 402 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms