RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PACS1Q6VY07 963 aa19.54■□□□□ 0.72
LRCH3-208ENST00000443727 CERS6Q6ZMG9 384 aa19.54■□□□□ 0.72
LRCH3-208ENST00000443727 EXD3Q8N9H8 876 aa19.54■□□□□ 0.72
LRCH3-208ENST00000443727 TFGQ92734 400 aaPredicted RBP19.54■□□□□ 0.72
LRCH3-208ENST00000443727 EIF2B3Q9NR50 452 aaKnown RBP19.54■□□□□ 0.72
LRCH3-208ENST00000443727 ANAPC5Q9UJX4 755 aa19.54■□□□□ 0.72
LRCH3-208ENST00000443727 RIMKLBQ9ULI2 386 aa19.54■□□□□ 0.72
LRCH3-208ENST00000443727 CFAP46Q8IYW2 2715 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 MATN2O00339 956 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 NKX2-8O15522 239 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 ZBTB11O95625 1053 aaPredicted RBP19.53■□□□□ 0.72
LRCH3-208ENST00000443727 CDH3P22223 829 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 KCNJ1P48048 391 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 KPNA2P52292 529 aaKnown RBP19.53■□□□□ 0.72
LRCH3-208ENST00000443727 MC1RQ01726 317 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 PRKG2Q13237 762 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 BOP1Q14137 746 aaKnown RBP19.53■□□□□ 0.72
LRCH3-208ENST00000443727 ZNF658BQ4V348 819 aaPredicted RBP19.53■□□□□ 0.72
LRCH3-208ENST00000443727 BORAQ6PGQ7 559 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 BPHLQ86WA6 291 aaPredicted RBP19.53■□□□□ 0.72
LRCH3-208ENST00000443727 CARFQ8N187 725 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 ZNF778Q96MU6 729 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 HGH1Q9BTY7 390 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 FGF21Q9NSA1 209 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 IL17BQ9UHF5 180 aa19.53■□□□□ 0.72
LRCH3-208ENST00000443727 AP3B1O00203 1094 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 MAP3K7O43318 606 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 OR1I1O60431 355 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 MT-ND3P03897 115 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 SFTPCP11686 197 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 DLSTP36957 453 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 AARS2Q5JTZ9 985 aaKnown RBP19.52■□□□□ 0.72
LRCH3-208ENST00000443727 PCID2Q5JVF3 399 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 D2HGDHQ8N465 521 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 OR52E1Q8NGJ3 308 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 STARD8Q92502 1023 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 CATSPER2Q96P56 530 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 TSSK1BQ9BXA7 367 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 TFB2MQ9H5Q4 396 aaKnown RBP19.52■□□□□ 0.72
LRCH3-208ENST00000443727 CHRAC1Q9NRG0 131 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 BFARQ9NZS9 450 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 CROTQ9UKG9 612 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 PADI1Q9ULC6 663 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 ASF1AQ9Y294 204 aa19.52■□□□□ 0.72
LRCH3-208ENST00000443727 ZNF462Q96JM2 2506 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 KATNA1O75449 491 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 TCN2P20062 427 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 TUBB4BP68371 445 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 PLOD1Q02809 727 aaPredicted RBP19.51■□□□□ 0.71
LRCH3-208ENST00000443727 ACVR1Q04771 509 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 TUBB2AQ13885 445 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 GPR19Q15760 415 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 PWWP2BQ6NUJ5 590 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 C16orf46Q6P387 395 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 FBXO38Q6PIJ6 1188 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 NAPRTQ6XQN6 538 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 HOOK3Q86VS8 718 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 AMIGO1Q86WK6 493 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 PEX13Q92968 403 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 FCRL4Q96PJ5 515 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 TUBB2BQ9BVA1 445 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 IL22Q9GZX6 179 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 XKR8Q9H6D3 395 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 FANCEQ9HB96 536 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 CATSPERZQ9NTU4 200 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 POMT2Q9UKY4 750 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 PCDHB3Q9Y5E6 796 aa19.51■□□□□ 0.71
LRCH3-208ENST00000443727 SLC9B1P1A6NJY1 282 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 B8ZZF3 427 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 TIAF1O95411 115 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 ITGB6P18564 788 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 CCR10P46092 362 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 NPY2RP49146 381 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 TERF1P54274 439 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 CSE1LP55060 971 aaKnown RBP19.5■□□□□ 0.71
LRCH3-208ENST00000443727 CRADDP78560 199 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 CDC20Q12834 499 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 NFATC3Q12968 1075 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 TRIP13Q15645 432 aaPredicted RBP19.5■□□□□ 0.71
LRCH3-208ENST00000443727 ZNF534Q76KX8 674 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 TMEM126BQ8IUX1 230 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 OTUD6BQ8N6M0 293 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 PPM1MQ96MI6 270 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 FAM117AQ9C073 453 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 C1GALT1Q9NS00 363 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 KCND3Q9UK17 655 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 TDRKHQ9Y2W6 561 aaKnown RBP19.5■□□□□ 0.71
LRCH3-208ENST00000443727 JRKLQ9Y4A0 524 aa19.5■□□□□ 0.71
LRCH3-208ENST00000443727 HEMK1Q9Y5R4 338 aaPredicted RBP19.5■□□□□ 0.71
LRCH3-208ENST00000443727 GCN1Q92616 2671 aaKnown RBP19.49■□□□□ 0.71
LRCH3-208ENST00000443727 GOLGA6L3A6NEY3 463 aa19.49■□□□□ 0.71
LRCH3-208ENST00000443727 C2orf74A8MZ97 194 aa19.49■□□□□ 0.71
LRCH3-208ENST00000443727 BTN3A3O00478 584 aa19.49■□□□□ 0.71
LRCH3-208ENST00000443727 BTN3A1O00481 513 aa19.49■□□□□ 0.71
LRCH3-208ENST00000443727 NTRK1P04629 796 aa19.49■□□□□ 0.71
LRCH3-208ENST00000443727 PLA2G2AP14555 144 aa19.49■□□□□ 0.71
LRCH3-208ENST00000443727 PRDX3P30048 256 aaKnown RBP19.49■□□□□ 0.71
LRCH3-208ENST00000443727 LDB1Q86U70 411 aaPredicted RBP19.49■□□□□ 0.71
LRCH3-208ENST00000443727 PRELID2Q8N945 189 aa19.49■□□□□ 0.71
LRCH3-208ENST00000443727 OR5AR1Q8NGP9 310 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms