RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ZNF638Q14966 1978 aaKnown RBP16.53■□□□□ 0.24
PMS1-213ENST00000441310 ASPDHA6ND91 283 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 ARHGAP33O14559 1287 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 TFECO14948 347 aaPredicted RBP16.53■□□□□ 0.24
PMS1-213ENST00000441310 RAP2AP10114 183 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 UGP2Q16851 508 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 TYSND1Q2T9J0 566 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 MFSD14CQ5VZR4 134 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 DTWD1Q8N5C7 304 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 FYTTD1Q96QD9 318 aaKnown RBP16.53■□□□□ 0.24
PMS1-213ENST00000441310 NARFLQ9H6Q4 476 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 CARS2Q9HA77 564 aaKnown RBP16.53■□□□□ 0.24
PMS1-213ENST00000441310 FKBP14Q9NWM8 211 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 PCDHGB6Q9Y5F9 930 aa16.53■□□□□ 0.24
PMS1-213ENST00000441310 I6L893 689 aaPredicted RBP16.52■□□□□ 0.24
PMS1-213ENST00000441310 BCKDKO14874 412 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 POLR1CO15160 346 aaPredicted RBP16.52■□□□□ 0.24
PMS1-213ENST00000441310 CNTN5O94779 1100 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 SEMA3DO95025 777 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 C1RP00736 705 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 ITGB1P05556 798 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 CYBAP13498 195 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 SLC1A2P43004 574 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
PMS1-213ENST00000441310 SIM2Q14190 667 aaPredicted RBP16.52■□□□□ 0.24
PMS1-213ENST00000441310 SMN1Q16637 294 aaKnown RBP16.52■□□□□ 0.24
PMS1-213ENST00000441310 SYT6Q5T7P8 510 aaPredicted RBP16.52■□□□□ 0.24
PMS1-213ENST00000441310 ZNF691Q5VV52 312 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 ESRP1Q6NXG1 681 aaKnown RBP16.52■□□□□ 0.24
PMS1-213ENST00000441310 NRARPQ7Z6K4 114 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 ZNF540Q8NDQ6 660 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 TWIST2Q8WVJ9 160 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 ADAM2Q99965 735 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 ALG9Q9H6U8 611 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 FZD10Q9ULW2 581 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 BTBD3Q9Y2F9 522 aa16.52■□□□□ 0.24
PMS1-213ENST00000441310 PRKD3O94806 890 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 HPRP00739 348 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 ACVR2AP27037 513 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 NPY2RP49146 381 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 SH3BP2P78314 561 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 KRR1Q13601 381 aaKnown RBP16.52■□□□□ 0.23
PMS1-213ENST00000441310 PXDC1Q5TGL8 231 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 TUBA3EQ6PEY2 450 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 ENPP6Q6UWR7 440 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 B3GNT8Q7Z7M8 397 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 MID1IP1Q9NPA3 183 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 DDIT4Q9NX09 232 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 Q9Y3F1 56 aa16.52■□□□□ 0.23
PMS1-213ENST00000441310 LAMA2P24043 3122 aaKnown RBP16.52■□□□□ 0.23
PMS1-213ENST00000441310 A0A1W2PP18 115 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 LRRC14BA6NHZ5 514 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 B8ZZF3 427 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 MITFO75030 526 aaPredicted RBP16.51■□□□□ 0.23
PMS1-213ENST00000441310 MTPNP58546 118 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 FOXM1Q08050 763 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 YIF1BQ5BJH7 314 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 LAIR1Q6GTX8 287 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 ERAP2Q6P179 960 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 PROSER1Q86XN7 944 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 CLYBLQ8N0X4 340 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 CCDC126Q96EE4 140 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 PHOX2BQ99453 314 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 RANGRFQ9HD47 186 aaPredicted RBP16.51■□□□□ 0.23
PMS1-213ENST00000441310 ERVK13-1Q9NX77 482 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 SLC2A6Q9UGQ3 507 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 GABRDO14764 452 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 AIREO43918 545 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 SCO1O75880 301 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 MED26O95402 600 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 SLC10A3P09131 477 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 HOXC8P31273 242 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 NOS2P35228 1153 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 GRIK1P39086 918 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 EEFSECP57772 596 aaKnown RBP16.51■□□□□ 0.23
PMS1-213ENST00000441310 LIMS2Q7Z4I7 341 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 OR8H2Q8N162 312 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 PPM1MQ96MI6 270 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.51■□□□□ 0.23
PMS1-213ENST00000441310 PCDHGB1Q9Y5G3 927 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 A0A087X1B8 175 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 PRSS23O95084 383 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 CPB1P15086 417 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 LBPP18428 481 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 CYP2A7P20853 494 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 DNAJB1P25685 340 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 DDOSTP39656 456 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 ZNF517Q6ZMY9 492 aaPredicted RBP16.51■□□□□ 0.23
PMS1-213ENST00000441310 ARHGAP36Q6ZRI8 547 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 SERINC5Q86VE9 423 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 NPY6RQ99463 290 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 BBS2Q9BXC9 721 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 RNF167Q9H6Y7 350 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 ATP13A2Q9NQ11 1180 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 SDR39U1Q9NRG7 319 aaPredicted RBP16.51■□□□□ 0.23
PMS1-213ENST00000441310 NPAP1Q9NZP6 1156 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 C3orf18Q9UK00 162 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 PCDHB14Q9Y5E9 798 aa16.51■□□□□ 0.23
PMS1-213ENST00000441310 LOC100506127A0A0U1RQW1 187 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms