RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 BRD3Q15059 726 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 FASTKD1Q53R41 847 aaKnown RBP19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 TSTD2Q5T7W7 516 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 PACS1Q6VY07 963 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 ZNF662Q6ZS27 426 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 PRICKLE2Q7Z3G6 844 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 HOOK3Q86VS8 718 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 OR13J1Q8NGT2 312 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 RANBP9Q96S59 729 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 TSSK1BQ9BXA7 367 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 SPRY4Q9C004 299 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 OR52A5Q9H2C5 316 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 FGF21Q9NSA1 209 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 SLC2A6Q9UGQ3 507 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 IL17BQ9UHF5 180 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 CROTQ9UKG9 612 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 TCAF1Q9Y4C2 921 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 PCDHB3Q9Y5E6 796 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 B8ZZF3 427 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 NKX2-8O15522 239 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 KATNA1O75449 491 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 PLA2G2AP14555 144 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 PDHA2P29803 388 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 RPL22P35268 128 aaKnown RBP19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 KPNA2P52292 529 aaKnown RBP19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 SESN2P58004 480 aaPredicted RBP19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 PRKG2Q13237 762 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 AARS2Q5JTZ9 985 aaKnown RBP19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 C4orf22Q6V702 233 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 CERS6Q6ZMG9 384 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 BPHLQ86WA6 291 aaPredicted RBP19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 TMEM126BQ8IUX1 230 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 CARFQ8N187 725 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 OTUD6BQ8N6M0 293 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 EXD3Q8N9H8 876 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 GLIS1Q8NBF1 620 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 PHC3Q8NDX5 983 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 OR4L1Q8NH43 312 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 TFGQ92734 400 aaPredicted RBP19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 CASS4Q9NQ75 786 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 POMT2Q9UKY4 750 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 ASF1AQ9Y294 204 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 PPP2R2CQ9Y2T4 447 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 PRSS21Q9Y6M0 314 aa19.31■□□□□ 0.68
SHROOM1-204ENST00000440118 SLC28A2O43868 658 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 CXCR5P32302 372 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 CSE1LP55060 971 aaKnown RBP19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 POLE2P56282 527 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 TUBB4BP68371 445 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 CCZ1BP86790 482 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 CCZ1P86791 482 aaPredicted RBP19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 TUBB2AQ13885 445 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 DRICH1Q6PGQ1 229 aaPredicted RBP19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 D2HGDHQ8N465 521 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 OR52E1Q8NGJ3 308 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 TUBB2BQ9BVA1 445 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 EIF2B3Q9NR50 452 aaKnown RBP19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 HOMER3Q9NSC5 361 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 SEMA5BQ9P283 1151 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 KCND3Q9UK17 655 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 PADI1Q9ULC6 663 aa19.3■□□□□ 0.68
SHROOM1-204ENST00000440118 AP3B1O00203 1094 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 KDM1AO60341 852 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 ITGB6P18564 788 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 SIX1Q15475 284 aaPredicted RBP19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 GPR19Q15760 415 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 PWWP2BQ6NUJ5 590 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 FBXO38Q6PIJ6 1188 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 AMIGO1Q86WK6 493 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 FCRL4Q96PJ5 515 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 TLR10Q9BXR5 811 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 ADNPQ9H2P0 1102 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 C1GALT1Q9NS00 363 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 CATSPERZQ9NTU4 200 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 BFARQ9NZS9 450 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 RIMKLBQ9ULI2 386 aa19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 DRG1Q9Y295 367 aaKnown RBP19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 TDRKHQ9Y2W6 561 aaKnown RBP19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 MRPS18BQ9Y676 258 aaKnown RBP19.29■□□□□ 0.68
SHROOM1-204ENST00000440118 BOD1L1Q8NFC6 3051 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 SLC9B1P1A6NJY1 282 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 C2orf74A8MZ97 194 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 BTN3A1O00481 513 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 OR1I1O60431 355 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 CPNE3O75131 537 aaKnown RBP19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 SCRG1O75711 98 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 TIAF1O95411 115 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 NTRK1P04629 796 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 PSMA3P25788 255 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 TERF1P54274 439 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 PLOD1Q02809 727 aaPredicted RBP19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 DEFB109BQ30KR1 87 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 PCID2Q5JVF3 399 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 NAPRTQ6XQN6 538 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 OR8K5Q8NH50 307 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 PEX13Q92968 403 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 PPM1MQ96MI6 270 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 ZNF778Q96MU6 729 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 SLC7A5P2Q9GIP4 190 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 IL22Q9GZX6 179 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms