RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 GNAO1P09471 354 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 LINC00032P0C843 101 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ACRV1P26436 265 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 RGS4P49798 205 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 C21orf59P57076 290 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 UBE3AQ05086 875 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ARHGEF7Q14155 803 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 FASTKQ14296 549 aaKnown RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 XKR5Q6UX68 686 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ZNF366Q8N895 744 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 SKA2Q8WVK7 121 aaPredicted RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ISG20Q96AZ6 181 aaKnown RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 PPWD1Q96BP3 646 aaKnown RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 PLEKHA8Q96JA3 519 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 C3orf30Q96M34 536 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 BRD9Q9H8M2 597 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 GIMAP2Q9UG22 337 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 EIF2B4Q9UI10 523 aaKnown RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 CDH7Q9ULB5 785 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 DHRS7Q9Y394 339 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 PRSS21Q9Y6M0 314 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 A0A1B0GTL3 188 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ZNF197O14709 1029 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 TIPRLO75663 272 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 FUCA1P04066 466 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 HNRNPA1P09651 372 aaKnown RBP eCLIP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ZNF77Q15935 545 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ZNF829Q3KNS6 432 aaPredicted RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 TTC33Q6PID6 262 aaPredicted RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 CYHR1Q6ZMK1 362 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 RFLNAQ6ZTI6 216 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 CHSY3Q70JA7 882 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ADIPOR2Q86V24 386 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 LEMD2Q8NC56 503 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ITFG1Q8TB96 612 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 TBC1D15Q8TC07 691 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 SMG7Q92540 1137 aaKnown RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 LMLNQ96KR4 655 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 EGFL8Q99944 293 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 TRIOBPQ9H2D6 2365 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 TRANK1O15050 2925 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 CD247P20963 164 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 SLC7A1P30825 629 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 HALP42357 657 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 RXRGP48443 463 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 SPIDRQ14159 915 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 GDPD4Q6W3E5 623 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 CENPSQ8N2Z9 138 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 ZNF557Q8N988 423 aaPredicted RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 DDHD1Q8NEL9 900 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 FAM110BQ8TC76 370 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 LKAAEAR1Q8TD35 194 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 TFAP2CQ92754 450 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 MTG2Q9H4K7 406 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 RPF2Q9H7B2 306 aaKnown RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 CXorf21Q9HAI6 301 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 B4GALT6Q9UBX8 382 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 MTCL1Q9Y4B5 1905 aaKnown RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 A0A1W2PPW3 197 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 TTC34A8MYJ7 566 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 H3BMQ9 156 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 K7EPI3 171 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 ZNF701M0R085 212 aaPredicted RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 ADAM23O75077 832 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 SEC24DO94855 1032 aaPredicted RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 LHCGRP22888 699 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 HOXA9P31269 272 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 BCAP31P51572 246 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 HK3P52790 923 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 POLR2LP62875 67 aaKnown RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 ATP1A4Q13733 1029 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 RPS6KA2Q15349 733 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 CDKN3Q16667 212 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 FAM109BQ6ICB4 259 aaPredicted RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 NANOGP8Q6NSW7 305 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 SCIMPQ6UWF3 145 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 DET1Q7L5Y6 550 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 NXPE1Q8N323 547 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 OR2A12Q8NGT7 310 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 COG8Q96MW5 612 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 CEP44Q9C0F1 390 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 AKTIPQ9H8T0 292 aa13.9□□□□□ -0.18
LIMD1-202ENST00000440097 TUBA8Q9NY65 449 aaPredicted RBP13.9□□□□□ -0.18
LIMD1-202ENST00000440097 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 SAC3D1A6NKF1 404 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 TRIM64CA6NLI5 447 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ZNF839A8K0R7 811 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 CHEK2O96017 543 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
LIMD1-202ENST00000440097 AKT1P31749 480 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 VIPR2P41587 438 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PTSQ03393 145 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PRKCQQ04759 706 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 SQLEQ14534 574 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 GPR33Q49SQ1 333 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ATP13A5Q4VNC0 1218 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 GPR107Q5VW38 600 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 TMEM215Q68D42 235 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms