RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 FCRL3Q96P31 734 aaPredicted RBP17.28■□□□□ 0.36
CCDC188-201ENST00000439765 SEMA6CQ9H3T2 930 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 THSD1Q9NS62 852 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 NINJ2Q9NZG7 142 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 TMEM9Q9P0T7 183 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 ACSL5Q9ULC5 683 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 SATB2Q9UPW6 733 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 UBA6A0AVT1 1052 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 LILRA5A6NI73 299 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 QSOX1O00391 747 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 USP1O94782 785 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 TTC4O95801 387 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 FTH1P02794 183 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 F7P08709 466 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 OR56A5P0C7T3 313 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 MTHFD1P11586 935 aaKnown RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 H2AFXP16104 143 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 ITGB6P18564 788 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 MPSTP25325 297 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 MLLT3P42568 568 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 ARCN1P48444 511 aaKnown RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 GPLD1P80108 840 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 ANKRD20A4Q4UJ75 823 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 ZNF658BQ4V348 819 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 STEAP4Q687X5 459 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 FOXR1Q6PIV2 292 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 UNC5AQ6ZN44 842 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 JPH3Q8WXH2 748 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 ELMO1Q92556 727 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 CFAP36Q96G28 342 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 PRR11Q96HE9 360 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 SLC46A1Q96NT5 459 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 UBL7Q96S82 380 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 PLAC1Q9HBJ0 212 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 SLC40A1Q9NP59 571 aa17.27■□□□□ 0.36
CCDC188-201ENST00000439765 ARGLU1Q9NWB6 273 aaPredicted RBP17.27■□□□□ 0.36
CCDC188-201ENST00000439765 C17orf113A0A1B0GUU1 675 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 NDUFS3O75489 264 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 SSTR1P30872 391 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 EPHA4P54764 986 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 EIF3BP55884 814 aaKnown RBP17.26■□□□□ 0.35
CCDC188-201ENST00000439765 GPX6P59796 221 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 CFHR1Q03591 330 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 COL9A2Q14055 689 aaPredicted RBP17.26■□□□□ 0.35
CCDC188-201ENST00000439765 SYTL3Q4VX76 610 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 SPANXN3Q5MJ09 141 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 BEND6Q5SZJ8 279 aaPredicted RBP17.26■□□□□ 0.35
CCDC188-201ENST00000439765 ZNF470Q6ECI4 717 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 MRNIPQ6NTE8 343 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 C3orf62Q6ZUJ4 267 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 SLITRK4Q8IW52 837 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 RCBTB1Q8NDN9 531 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 WDR36Q8NI36 951 aaKnown RBP17.26■□□□□ 0.35
CCDC188-201ENST00000439765 LKAAEAR1Q8TD35 194 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 LIN37Q96GY3 246 aaPredicted RBP17.26■□□□□ 0.35
CCDC188-201ENST00000439765 TMEM74Q96NL1 305 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 INSM2Q96T92 566 aaPredicted RBP17.26■□□□□ 0.35
CCDC188-201ENST00000439765 FAM169AQ9Y6X4 670 aa17.26■□□□□ 0.35
CCDC188-201ENST00000439765 CCDC187A0A096LP49 1063 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 ZCWPW2A0A1B0GU75 182 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 IQCF5A8MTL0 148 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 PRMT5O14744 637 aaPredicted RBP17.25■□□□□ 0.35
CCDC188-201ENST00000439765 GSTA2P09210 222 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 TYRP1P17643 537 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 PDHA2P29803 388 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 CCKBRP32239 447 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 CSE1LP55060 971 aaKnown RBP17.25■□□□□ 0.35
CCDC188-201ENST00000439765 CRYMQ14894 314 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 PLCL1Q15111 1095 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 TYSND1Q2T9J0 566 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 ZNF574Q6ZN55 896 aaPredicted RBP17.25■□□□□ 0.35
CCDC188-201ENST00000439765 KRT222Q8N1A0 295 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 MREGQ8N565 214 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 NCSTNQ92542 709 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 CCDC74BQ96LY2 380 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 STRADBQ9C0K7 418 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 OR52A5Q9H2C5 316 aa17.25■□□□□ 0.35
CCDC188-201ENST00000439765 IGHV5-10-1A0A0J9YXX1 117 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CDRT15L2A8MXV6 281 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 RIPK2O43353 540 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 SPAG6O75602 509 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 UBXN7O94888 489 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 GSTM1P09488 218 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 HGFP14210 728 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 RBMS1P29558 406 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 GSTM4Q03013 218 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 ZFP36L1Q07352 338 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 SNAP47Q5SQN1 464 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 UBAP2Q5T6F2 1119 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 PTRHD1Q6GMV3 140 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 NEPROQ6NW34 567 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 GPR155Q7Z3F1 870 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 SDCCAG8Q86SQ7 713 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CLEC14AQ86T13 490 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CILP2Q8IUL8 1156 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 UNC5BQ8IZJ1 945 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms