RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SLC5A10A0PJK1 596 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 OR6C74A6NCV1 312 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 TLCD2A6NGC4 264 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 EIF4E1BA6NMX2 242 aaKnown RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 GOLGA8MH3BSY2 632 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 DNALI1O14645 258 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 ITGB6P18564 788 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 OGNP20774 298 aaKnown RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 RPS3P23396 243 aaKnown RBP eCLIP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 PREPP48147 710 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 HSPA14Q0VDF9 509 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 PTK6Q13882 451 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 SEMA3AQ14563 771 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 DNAJC21Q5F1R6 531 aaKnown RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 ANKRD22Q5VYY1 191 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 CES3Q6UWW8 571 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 LDB1Q86U70 411 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 CAND1Q86VP6 1230 aaKnown RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 AMIGO1Q86WK6 493 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 DTX1Q86Y01 620 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 BMPERQ8N8U9 685 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 NAT8LQ8N9F0 302 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 PHC3Q8NDX5 983 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 JPH3Q8WXH2 748 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 SLCO2A1Q92959 643 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 ZNF669Q96BR6 464 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-216ENST00000439475 OR6C1Q96RD1 312 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 MAP3K3Q99759 626 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 NAT9Q9BTE0 207 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 CCDC68Q9H2F9 335 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 FOXJ2Q9P0K8 574 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 SEMA5BQ9P283 1151 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 MAD1L1Q9Y6D9 718 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 RPS6KL1Q9Y6S9 549 aa10.19□□□□□ -0.78
MCF2L-216ENST00000439475 GSAPA4D1B5 854 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 C2orf74A8MZ97 194 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 K7ENP7 123 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 RAD1O60671 282 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 AVILO75366 819 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 USP1O94782 785 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 TMEM63AO94886 807 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 ZBTB11O95625 1053 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 ESR1P03372 595 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 MT-ND3P03897 115 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 NELFEP18615 380 aaKnown RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 POLR2CP19387 275 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CHRM3P20309 590 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CDH3P22223 829 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 MAP4P27816 1152 aaKnown RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 ACADLP28330 430 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CASQ1P31415 396 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CCR7P32248 378 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 SHMT2P34897 504 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 EIF3BP55884 814 aaKnown RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 HSD11B2P80365 405 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 RHDQ02161 417 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 PRKG2Q13237 762 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 TGIF1Q15583 401 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 ANKRD20A4Q4UJ75 823 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 ZNF658BQ4V348 819 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 PLEKHS1Q5SXH7 462 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 ARHGAP40Q5TG30 622 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 NEPROQ6NW34 567 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 INO80CQ6PI98 192 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 OTOAQ7RTW8 1153 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 TMEM135Q86UB9 458 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 PPP1R3BQ86XI6 285 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CREG2Q8IUH2 290 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 RASGRP3Q8IV61 690 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 KLHL7Q8IXQ5 586 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CACNA2D3Q8IZS8 1091 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 NLGN4XQ8N0W4 816 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 RAB42Q8N4Z0 105 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 NLGN4YQ8NFZ3 816 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 OR52E1Q8NGJ3 308 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 MAGEC3Q8TD91 643 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 KIAA1143Q96AT1 154 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 FOPNLQ96NB1 174 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 FCRL4Q96PJ5 515 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 UBL7Q96S82 380 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CTRCQ99895 268 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 FANCEQ9HB96 536 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 SYTL2Q9HCH5 934 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 C1GALT1Q9NS00 363 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 KCND1Q9NSA2 647 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 INTS10Q9NVR2 710 aaKnown RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 MARCH4Q9P2E8 410 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 RARRES3Q9UL19 164 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
MCF2L-216ENST00000439475 TDRKHQ9Y2W6 561 aaKnown RBP10.18□□□□□ -0.78
MCF2L-216ENST00000439475 CHD8Q9HCK8 2581 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 IGHV5-51A0A0C4DH38 117 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 IQCF5A8MTL0 148 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 E5RI56 91 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 KIF1CO43896 1103 aaKnown RBP10.17□□□□□ -0.78
MCF2L-216ENST00000439475 GPC4O75487 556 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 STK17BO94768 372 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 TTC4O95801 387 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
MCF2L-216ENST00000439475 FGF5P12034 268 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms