RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SMOXQ9NWM0 555 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 HRASLS2Q9NWW9 162 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 ZDHHC3Q9NYG2 299 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CRLS1Q9UJA2 301 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 ACSL5Q9ULC5 683 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 VPS4AQ9UN37 437 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 ZNF232Q9UNY5 417 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 PLAAQ9Y263 795 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 WDR37Q9Y2I8 494 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 PCDHGA6Q9Y5G7 932 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CFAP20Q9Y6A4 193 aaKnown RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 IGHV5-51A0A0C4DH38 117 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 LOC285095A0A1B0GVY8 99 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 GSAPA4D1B5 854 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 OR6C74A6NCV1 312 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 GOLGA6L3A6NEY3 463 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 MGAT4DA6NG13 374 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 C9J4A7 227 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 AKR1B15C9JRZ8 316 aaPredicted RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 GPR39O43194 453 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 ZNF189O75820 626 aaPredicted RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 AGFG2O95081 481 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 CRTAMO95727 393 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 RECKO95980 971 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 POLBP06746 335 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 FOLR1P15328 257 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 NR1D1P20393 614 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 ITGALP20701 1170 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 CYP2A7P20853 494 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 LPOP22079 712 aaPredicted RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 F8A1P23610 371 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 PTPN4P29074 926 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 GSDMDP57764 484 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 PPP1CAP62136 330 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 WASHC5Q12768 1159 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 UGT8Q16880 541 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 ASTE1Q2TB18 679 aaPredicted RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 FAM182AQ5T1J6 154 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 DUS1LQ6P1R4 473 aaKnown RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 C11orf96Q7Z7L8 435 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 DAAM2Q86T65 1068 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 SYVN1Q86TM6 617 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 KATNAL2Q8IYT4 538 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 RCOR2Q8IZ40 523 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 FAM26EQ8N5C1 309 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 GOLGA6L1Q8N7Z2 621 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 HM13Q8TCT9 377 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 ZNF398Q8TD17 642 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 HEXDCQ8WVB3 486 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 LCN9Q8WX39 176 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 CPT1BQ92523 772 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 CLIP3Q96DZ5 547 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 OXNAD1Q96HP4 312 aaPredicted RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 CHP1Q99653 195 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 MAP3K3Q99759 626 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 CCM2Q9BSQ5 444 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 SLC25A23Q9BV35 468 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 WWP1Q9H0M0 922 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 TSPAN10Q9H1Z9 355 aaPredicted RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 SRMSQ9H3Y6 488 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 ASB8Q9H765 288 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 KIR3DX1Q9H7L2 352 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 LRRC4CQ9HCJ2 640 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 IL17CQ9P0M4 197 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 SLC24A2Q9UI40 661 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 GDF2Q9UK05 429 aaPredicted RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 TLK1Q9UKI8 766 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 TMPRSS11EQ9UL52 423 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 SNX7Q9UNH6 387 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 MYO9AB2RTY4 2548 aa7.57□□□□□ -1.2
VPS50-204ENST00000438395 PRRC2CQ9Y520 2896 aaKnown RBP7.57□□□□□ -1.2
VPS50-204ENST00000438395 UNC79Q9P2D8 2635 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 hCG_1818297A0A087WSY0 165 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 C5orf60A6NFR6 353 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 ARGFXA6NJG6 315 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 APOC4-APOC2K7ER74 178 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 TIAF1O95411 115 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 APOC2P02655 101 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 GP1BBP13224 206 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 HOXB4P17483 251 aaPredicted RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 POLR2CP19387 275 aaPredicted RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 CD68P34810 354 aaPredicted RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 HADHAP40939 763 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 MAGEA1P43355 309 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 PREPP48147 710 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 ARCN1P48444 511 aaKnown RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 MLLT10P55197 1068 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 NAP1L1P55209 391 aaKnown RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 TAF1AQ15573 450 aaPredicted RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 GPR19Q15760 415 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 SKOR2Q2VWA4 1001 aaPredicted RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 BCL7AQ4VC05 210 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 METRNLQ641Q3 311 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 C11orf63Q6NUN7 778 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 DARS2Q6PI48 645 aaKnown RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 SLCO4C1Q6ZQN7 724 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 FAM83HQ6ZRV2 1179 aaPredicted RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 BBS12Q6ZW61 710 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 TMEM135Q86UB9 458 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 APLFQ8IW19 511 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms