RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PCDHGA10Q9Y5H3 936 aa13.7□□□□□ -0.22
LINC01088-201ENST00000437737 MRFAP1Q9Y605 127 aa13.7□□□□□ -0.22
LINC01088-201ENST00000437737 APCP25054 2843 aa13.7□□□□□ -0.22
LINC01088-201ENST00000437737 POLEQ07864 2286 aa13.7□□□□□ -0.22
LINC01088-201ENST00000437737 CCDC88CQ9P219 2028 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 HEATR9A2RTY3 570 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 ZNF487B1APH4 448 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 PGRMC1O00264 195 aaKnown RBP13.69□□□□□ -0.22
LINC01088-201ENST00000437737 IPO13O94829 963 aaKnown RBP13.69□□□□□ -0.22
LINC01088-201ENST00000437737 KRT1P04264 644 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CAPN1P07384 714 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CYP2A7P20853 494 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CCNCP24863 283 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CA5AP35218 305 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 GJC1P36383 396 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 TMEM115Q12893 351 aaPredicted RBP13.69□□□□□ -0.22
LINC01088-201ENST00000437737 MMRN1Q13201 1228 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 XRCC4Q13426 336 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 MYBPC3Q14896 1274 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CRB2Q5IJ48 1285 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 IGFL3Q6UXB1 125 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 MRGPREQ86SM8 312 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CUZD1Q86UP6 607 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 AMZ2Q86W34 360 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CCDC50Q8IVM0 306 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 LRRN4Q8WUT4 740 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 ALG3Q92685 438 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 IP6K3Q96PC2 410 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 BARD1Q99728 777 aaKnown RBP13.69□□□□□ -0.22
LINC01088-201ENST00000437737 MAK16Q9BXY0 300 aaKnown RBP13.69□□□□□ -0.22
LINC01088-201ENST00000437737 GPR63Q9BZJ6 419 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 NFKBIL1Q9UBC1 381 aaPredicted RBP13.69□□□□□ -0.22
LINC01088-201ENST00000437737 BTRCQ9Y297 605 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 ZNF711Q9Y462 761 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 CFAP20Q9Y6A4 193 aaKnown RBP13.69□□□□□ -0.22
LINC01088-201ENST00000437737 ZGRF1Q86YA3 2104 aa13.69□□□□□ -0.22
LINC01088-201ENST00000437737 LRRD1A4D1F6 860 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 TMEM150CB9EJG8 249 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 PEX12O00623 359 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 LDB2O43679 373 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 KCNJ13O60928 360 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 PYGMP11217 842 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
LINC01088-201ENST00000437737 AGXTP21549 392 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 CDH3P22223 829 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 KDELR1P24390 212 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 PTPN7P35236 360 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 ARCN1P48444 511 aaKnown RBP13.68□□□□□ -0.22
LINC01088-201ENST00000437737 KPNA2P52292 529 aaKnown RBP13.68□□□□□ -0.22
LINC01088-201ENST00000437737 ADCY2Q08462 1091 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 PPP2R5EQ16537 467 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 LONRF2Q1L5Z9 754 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 TFDP3Q5H9I0 405 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 DCAF10Q5QP82 559 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 NCBP2-AS2Q69YL0 99 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 Q6ZS92 163 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 TMC3Q7Z5M5 1100 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 CREG2Q8IUH2 290 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 CARFQ8N187 725 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 COG1Q8WTW3 980 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 VPS35Q96QK1 796 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 ZNF552Q9H707 407 aaPredicted RBP13.68□□□□□ -0.22
LINC01088-201ENST00000437737 HOMER3Q9NSC5 361 aa13.68□□□□□ -0.22
LINC01088-201ENST00000437737 FER1L5A0AVI2 2057 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 GOLGA6L10A0A0M3HER8 536 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 SLC9B1P1A6NJY1 282 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 POP7O75817 140 aaKnown RBP13.67□□□□□ -0.22
LINC01088-201ENST00000437737 TJP3O95049 919 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 IGHEP01854 428 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 MMP2P08253 660 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 CD48P09326 243 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 ZFXP17010 805 aaPredicted RBP13.67□□□□□ -0.22
LINC01088-201ENST00000437737 BPIP17213 487 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 ITGA3P26006 1051 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 PBLDP30039 288 aaPredicted RBP13.67□□□□□ -0.22
LINC01088-201ENST00000437737 PREPP48147 710 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 PRKAA1Q13131 559 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 TFDP2Q14188 446 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 NFE2L1Q14494 772 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 PAFAH1B3Q15102 231 aaKnown RBP13.67□□□□□ -0.22
LINC01088-201ENST00000437737 DUS1LQ6P1R4 473 aaKnown RBP13.67□□□□□ -0.22
LINC01088-201ENST00000437737 KCNMB4Q86W47 210 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 CPNE8Q86YQ8 564 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 OR1L3Q8NH93 324 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 FAM71BQ8TC56 605 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 BRSK1Q8TDC3 778 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 FATE1Q969F0 183 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 CAPZA3Q96KX2 299 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 TSGA13Q96PP4 275 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 DPH2Q9BQC3 489 aaPredicted RBP13.67□□□□□ -0.22
LINC01088-201ENST00000437737 DHRS4Q9BTZ2 278 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 MAGEE1Q9HCI5 957 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 COPG2Q9UBF2 871 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 ITGB1BP2Q9UKP3 347 aa13.67□□□□□ -0.22
LINC01088-201ENST00000437737 SVILO95425 2214 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 CTAGE15A4D2H0 777 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 MAP3K7O43318 606 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms