RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 BTBD3Q9Y2F9 522 aa11.22□□□□□ -0.61
SNHG3-202ENST00000437681 ENTPD2Q9Y5L3 495 aa11.22□□□□□ -0.61
SNHG3-202ENST00000437681 ST14Q9Y5Y6 855 aa11.22□□□□□ -0.61
SNHG3-202ENST00000437681 CCL22O00626 93 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 AHSGP02765 367 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 C8GP07360 202 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 CCKBRP32239 447 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 LIMK2P53671 638 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 PMS2P54278 862 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 IRX1P78414 480 aaPredicted RBP11.21□□□□□ -0.61
SNHG3-202ENST00000437681 SHC2P98077 582 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 SMAD1Q15797 465 aaKnown RBP11.21□□□□□ -0.61
SNHG3-202ENST00000437681 LGSNQ5TDP6 509 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 TMEM26Q6ZUK4 368 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 KMT5CQ86Y97 462 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 RIBC1Q8N443 379 aaPredicted RBP11.21□□□□□ -0.61
SNHG3-202ENST00000437681 ACVR1CQ8NER5 493 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 IFI44Q8TCB0 444 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 RMDN2Q96LZ7 410 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 TMEM74Q96NL1 305 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 DHRS4Q9BTZ2 278 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.61
SNHG3-202ENST00000437681 CDC42EP4Q9H3Q1 356 aaKnown RBP11.21□□□□□ -0.61
SNHG3-202ENST00000437681 TOR4AQ9NXH8 423 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 TXNDC16Q9P2K2 825 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 TMCO1Q9UM00 188 aa11.21□□□□□ -0.61
SNHG3-202ENST00000437681 PCYT1BQ9Y5K3 369 aaPredicted RBP11.21□□□□□ -0.61
SNHG3-202ENST00000437681 MN1Q10571 1320 aaPredicted RBP11.21□□□□□ -0.62
SNHG3-202ENST00000437681 OR2AG2A6NM03 316 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 RHPN2P1A8MT19 583 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 E5RI56 91 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 SDC3O75056 442 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 WISP3O95389 354 aaPredicted RBP11.21□□□□□ -0.62
SNHG3-202ENST00000437681 VIPP01282 170 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 ERVK-10P10266 1014 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CRABP2P29373 138 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CCR7P32248 378 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CSRP3P50461 194 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 EIF3BP55884 814 aaKnown RBP11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CDKL1Q00532 357 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 IL9RQ01113 521 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 FASTKD3Q14CZ7 662 aaKnown RBP11.21□□□□□ -0.62
SNHG3-202ENST00000437681 ZNF542PQ5EBM4 170 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 ZNF648Q5T619 568 aaPredicted RBP11.21□□□□□ -0.62
SNHG3-202ENST00000437681 KCTD16Q68DU8 428 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 TTC23LQ6PF05 361 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CES3Q6UWW8 571 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 TIFABQ6ZNK6 161 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 EFL1Q7Z2Z2 1120 aaKnown RBP11.21□□□□□ -0.62
SNHG3-202ENST00000437681 SPRED1Q7Z699 444 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 ANKMY2Q8IV38 441 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CFAP206Q8IYR0 622 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 OR10G6Q8NH81 332 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 OR5K2Q8NHB8 316 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 SLC37A2Q8TED4 501 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.62
SNHG3-202ENST00000437681 IFT81Q8WYA0 676 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CXorf40BQ96DE9 158 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 CABS1Q96KC9 395 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 DEPDC7Q96QD5 511 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 SLC40A1Q9NP59 571 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 VWA7Q9Y334 891 aa11.21□□□□□ -0.62
SNHG3-202ENST00000437681 OR1I1O60431 355 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 MTX2O75431 263 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 PSIP1O75475 530 aaKnown RBP11.2□□□□□ -0.62
SNHG3-202ENST00000437681 C9P02748 559 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 ERGP11308 486 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 AK4P27144 223 aaPredicted RBP11.2□□□□□ -0.62
SNHG3-202ENST00000437681 NOVA1P51513 510 aaKnown RBP11.2□□□□□ -0.62
SNHG3-202ENST00000437681 HHEXQ03014 270 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 C1orf61Q13536 156 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 ZNF549Q6P9A3 640 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 SLC30A9Q6PML9 568 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 FAM83HQ6ZRV2 1179 aaPredicted RBP11.2□□□□□ -0.62
SNHG3-202ENST00000437681 OTOAQ7RTW8 1153 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 TMPRSS7Q7RTY8 843 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 DCUN1D3Q8IWE4 304 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 KLHDC8AQ8IYD2 350 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 DEFB124Q8NES8 71 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 OR2I1PQ8NGU4 316 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 SLC44A1Q8WWI5 657 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 WWP1Q9H0M0 922 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 LRRN3Q9H3W5 708 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 TRMT6Q9UJA5 497 aaKnown RBP11.2□□□□□ -0.62
SNHG3-202ENST00000437681 NFU1Q9UMS0 254 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 RABL2BQ9UNT1 228 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 KCNK6Q9Y257 313 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 NEUROG3Q9Y4Z2 214 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 KLK4Q9Y5K2 254 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 RNF215Q9Y6U7 377 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 ESYT3A0FGR9 886 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 HGSO14964 777 aaPredicted RBP11.2□□□□□ -0.62
SNHG3-202ENST00000437681 FFAR2O15552 330 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 DUX1O43812 170 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 OPA1O60313 960 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 HAUS5O94927 633 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 CELA2BP08218 269 aaPredicted RBP11.2□□□□□ -0.62
SNHG3-202ENST00000437681 FTH1P19P0C7X4 201 aa11.2□□□□□ -0.62
SNHG3-202ENST00000437681 BRAFP15056 766 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms