RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 MARK1Q9P0L2 795 aa11.72□□□□□ -0.53
CTCFL-209ENST00000433949 OPTCQ9UBM4 332 aa11.72□□□□□ -0.53
CTCFL-209ENST00000433949 RIMS3Q9UJD0 308 aa11.72□□□□□ -0.53
CTCFL-209ENST00000433949 ANGPTL3Q9Y5C1 460 aa11.72□□□□□ -0.53
CTCFL-209ENST00000433949 PRSS21Q9Y6M0 314 aa11.72□□□□□ -0.53
CTCFL-209ENST00000433949 IFRD1O00458 451 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 BNIP3LO60238 219 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 KATNA1O75449 491 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 EEDO75530 441 aaKnown RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 ADH1CP00326 375 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 CAPNS1P04632 268 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 UGT2B4P06133 528 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 CAPN1P07384 714 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 ENO2P09104 434 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 POLR2EP19388 210 aaKnown RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 HMOX2P30519 316 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 HSPA13P48723 471 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 SPINT3P49223 89 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 DIO3P55073 304 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 EMX2Q04743 252 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 FCHO2Q0JRZ9 810 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 MAD2L1Q13257 205 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 SMAD4Q13485 552 aaKnown RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 SFT2D3Q587I9 215 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 LETMD1Q6P1Q0 360 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 TMEM154Q6P9G4 183 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 PRR23BQ6ZRT6 265 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 KIAA0907Q7Z7F0 614 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 DHFR2Q86XF0 187 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 SFTPA1Q8IWL2 248 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 KIAA1958Q8N8K9 716 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 FNDC5Q8NAU1 212 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 OR4F6Q8NGB9 312 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 ZUFSPQ96AP4 578 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 ELSPBP1Q96BH3 223 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 LRRC58Q96CX6 371 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 CD244Q9BZW8 370 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 HEBP1Q9NRV9 189 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 SMOXQ9NWM0 555 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 WWOXQ9NZC7 414 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 MAP10Q9P2G4 905 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 GIMAP2Q9UG22 337 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 LEF1Q9UJU2 399 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 CNOT11Q9UKZ1 510 aaKnown RBP11.71□□□□□ -0.53
CTCFL-209ENST00000433949 ASB1Q9Y576 335 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 AP4S1Q9Y587 144 aa11.71□□□□□ -0.53
CTCFL-209ENST00000433949 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 TCRBV3S1A0A5B6 114 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 FAM234BA2RU67 622 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 ANTXRLA6NF34 631 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 OR7A17O14581 309 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 SYNCRIPO60506 623 aaKnown RBP11.71□□□□□ -0.54
CTCFL-209ENST00000433949 TULP3O75386 442 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 WDR47O94967 919 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 NFATC1O95644 943 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 ANXA5P08758 320 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 ITGB6P18564 788 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 LHCGRP22888 699 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 SLC7A1P30825 629 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 AQP4P55087 323 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 CDKL1Q00532 357 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 TRAF3Q13114 568 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 PRKG2Q13237 762 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 RUNX3Q13761 415 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 PTCRAQ6ISU1 281 aaPredicted RBP11.71□□□□□ -0.54
CTCFL-209ENST00000433949 IL27RAQ6UWB1 636 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 LAYNQ6UX15 382 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 Q6ZSR9 355 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 ADIPOR2Q86V24 386 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 TCAIMQ8N3R3 496 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 SNX31Q8N9S9 440 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 FAM156AQ8NDB6 213 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 LKAAEAR1Q8TD35 194 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 MIEF2Q96C03 454 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 RHBDF1Q96CC6 855 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 LRIG1Q96JA1 1093 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 PPP3R2Q96LZ3 170 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 HEPHQ9BQS7 1158 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 NTMT1Q9BV86 223 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 ZDHHC4Q9NPG8 344 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 SLC52A3Q9NQ40 469 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 PDP2Q9P2J9 529 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 SLCO3A1Q9UIG8 710 aa11.71□□□□□ -0.54
CTCFL-209ENST00000433949 CCDC154A6NI56 674 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 A8MX80 341 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 CFAP99D6REC4 459 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 K7EPI3 171 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 GUCA1CO95843 209 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 EBLN1P0CF75 366 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 IL9P15248 144 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 PCSK2P16519 638 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 CA5AP35218 305 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 HSPA7P48741 367 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 POLR2JP52435 117 aaKnown RBP11.7□□□□□ -0.54
CTCFL-209ENST00000433949 NME5P56597 212 aa11.7□□□□□ -0.54
CTCFL-209ENST00000433949 DCDC1P59894 354 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms