RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 VPS51Q9UID3 782 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 EIF3LQ9Y262 564 aaKnown RBP11.59□□□□□ -0.55
CD44-209ENST00000433892 C1orf232A0A0U1RR37 186 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 G3V2T6 193 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 IFRD1O00458 451 aaPredicted RBP11.58□□□□□ -0.55
CD44-209ENST00000433892 RGS14O43566 566 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 PGLSO95336 258 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 GLUD1P00367 558 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 SELPP16109 830 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 CD247P20963 164 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 TTKP33981 857 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 RGS4P49798 205 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 PPP1R8Q12972 351 aaKnown RBP11.58□□□□□ -0.55
CD44-209ENST00000433892 NFATC2Q13469 925 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 MYBPC3Q14896 1274 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 TAF12Q16514 161 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 TCTN1Q2MV58 587 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 TBC1D25Q3MII6 688 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 SPANXN4Q5MJ08 99 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 ELMSAN1Q6PJG2 1045 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 MBOAT1Q6ZNC8 495 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 LIX1Q8N485 282 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 TET1Q8NFU7 2136 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 CLHC1Q8NHS4 586 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 WFDC5Q8TCV5 224 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 OVCA2Q8WZ82 227 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 GFM2Q969S9 779 aaKnown RBP11.58□□□□□ -0.55
CD44-209ENST00000433892 MTFMTQ96DP5 389 aaKnown RBP11.58□□□□□ -0.55
CD44-209ENST00000433892 THAP11Q96EK4 314 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 DOK1Q99704 481 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.55
CD44-209ENST00000433892 YTHDF1Q9BYJ9 559 aaKnown RBP11.58□□□□□ -0.55
CD44-209ENST00000433892 CD244Q9BZW8 370 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 DPY30Q9C005 99 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 IL26Q9NPH9 171 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 SLC25A37Q9NYZ2 338 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 OPTCQ9UBM4 332 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 CDH7Q9ULB5 785 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 ZNF490Q9ULM2 529 aaPredicted RBP11.58□□□□□ -0.55
CD44-209ENST00000433892 OARD1Q9Y530 152 aa11.58□□□□□ -0.55
CD44-209ENST00000433892 THSD7BQ9C0I4 1608 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 SMAD6O43541 496 aaKnown RBP11.58□□□□□ -0.56
CD44-209ENST00000433892 NOBOXO60393 691 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 ULK1O75385 1050 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 SEC22BO75396 215 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 CLDN7O95471 211 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 CST1P01037 141 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 PGRP06401 933 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 MATN1P21941 496 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 AKT1P31749 480 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 CSKP41240 450 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 TM4SF4P48230 202 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 CYP4F3Q08477 520 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 ANKRD34AQ69YU3 496 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 SULT1C3Q6IMI6 304 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 MSRB3Q8IXL7 192 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 PHACTR4Q8IZ21 702 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 RBFAQ8N0V3 343 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 ZNF548Q8NEK5 533 aaPredicted RBP11.58□□□□□ -0.56
CD44-209ENST00000433892 SGCDQ92629 289 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 CCDC115Q96NT0 180 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 UGT2B28Q9BY64 529 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 ADNPQ9H2P0 1102 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 TOR3AQ9H497 397 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 GORASP2Q9H8Y8 452 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 FANCEQ9HB96 536 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 PLGRKTQ9HBL7 147 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 ZNHIT2Q9UHR6 403 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 GNPTGQ9UJJ9 305 aa11.58□□□□□ -0.56
CD44-209ENST00000433892 LOC730098B7Z3J9 87 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 DGKAP23743 735 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SMAD3P84022 425 aaKnown RBP11.57□□□□□ -0.56
CD44-209ENST00000433892 SEMG2Q02383 582 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 IMPG1Q17R60 797 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 GTDC1Q4AE62 458 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 ZNF773Q6PK81 442 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SUSD1Q6UWL2 747 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SNX20Q7Z614 316 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 NECAB2Q7Z6G3 386 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 NPAS4Q8IUM7 802 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 RGL4Q8IZJ4 473 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SLC22A17Q8WUG5 538 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 RHBDF1Q96CC6 855 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SLC22A12Q96S37 553 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 LATS2Q9NRM7 1088 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SLC6A13Q9NSD5 602 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 MTRRQ9UBK8 725 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 OR51B4Q9Y5P0 310 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 PLXNA4Q9HCM2 1894 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 ELOVL7A1L3X0 281 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 GNGT2O14610 69 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 PRKD3O94806 890 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 MBL2P11226 248 aaPredicted RBP11.57□□□□□ -0.56
CD44-209ENST00000433892 IL7RP16871 459 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 MSH3P20585 1137 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 ITGALP20701 1170 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 RPS3P23396 243 aaKnown RBP eCLIP11.57□□□□□ -0.56
CD44-209ENST00000433892 GNPDA1P46926 289 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 CDH18Q13634 790 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms