RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 hCG_2039718K7EN88 272 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 POLR2EP19388 210 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CLCNKBP51801 687 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 AIF1P55008 147 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 PWP1Q13610 501 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 MAPKAPK3Q16644 382 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 AP5B1Q2VPB7 878 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 FAM174BQ3ZCQ3 159 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CEP78Q5JTW2 689 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF544Q6NX49 715 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 NEK10Q6ZWH5 1172 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 P3H2Q8IVL5 708 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TTC29Q8NA56 475 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 NETO1Q8TDF5 533 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ISG20Q96AZ6 181 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TSGA13Q96PP4 275 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TMEM30AQ9NV96 361 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 NAALAD2Q9Y3Q0 740 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ASB1Q9Y576 335 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 GJB3O75712 270 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 CNPP09543 421 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 MYCLP1P12525 358 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 LILRA4P59901 499 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 MADCAM1Q13477 382 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 SEMA3AQ14563 771 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC14A2Q15849 920 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 RFTN2Q52LD8 501 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 PRSS36Q5K4E3 855 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 KIAA0319Q5VV43 1072 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 Q6ZSR9 355 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 GPRIN3Q6ZVF9 776 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 GALNT10Q86SR1 603 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 TCAIMQ8N3R3 496 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 OR6F1Q8NGZ6 308 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 REXO5Q96IC2 774 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 CEP295NLQ96MC4 621 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 NEDD4LQ96PU5 975 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 SMOQ99835 787 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 TNKS2Q9H2K2 1166 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 DUSP21Q9H596 190 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 RPRD1BQ9NQG5 326 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 VNN3Q9NY84 501 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 ZIM2Q9NZV7 527 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 UXTQ9UBK9 157 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 PRELID1Q9Y255 219 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 PCDHGB6Q9Y5F9 930 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 COL11A1P12107 1806 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 METTL15A6NJ78 407 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 LOC110117498-PIK3R3F6TDL0 507 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 HAT1O14929 419 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 KMOO15229 486 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 CACNG3O60359 315 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 CAPN1P07384 714 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 EDNRBP24530 442 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 ZBTB6Q15916 424 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 SMU1Q2TAY7 513 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 WDR45BQ5MNZ6 344 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC27A1Q6PCB7 646 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 HIPK1Q86Z02 1210 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 APOL4Q9BPW4 351 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 ITPAQ9BY32 194 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 SPATC1LQ9H0A9 340 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 CCDC177Q9NQR7 707 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 RNF6Q9Y252 685 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 PCDHGB1Q9Y5G3 927 aa11.35□□□□□ -0.59
HMGCS1-202ENST00000433297 J3KR12 359 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 PIRO00625 290 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC7A4O43246 635 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 CREG1O75629 220 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 PAPSS2O95340 614 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 CRYZL1O95825 349 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 LGALS2P05162 132 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 HOXD8P13378 290 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 FDXRP22570 491 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 AZGP1P25311 298 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 HOXA11P31270 313 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC26A2P50443 739 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 GNG2P59768 71 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 RPL38P63173 70 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC10A7Q0GE19 358 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 TBRG1Q3YBR2 411 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 TRIM60Q495X7 471 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF484Q5JVG2 852 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 LYPD8Q6UX82 237 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 CEP68Q76N32 757 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 NRARPQ7Z6K4 114 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ZDHHC21Q8IVQ6 265 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 UBE2J2Q8N2K1 259 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 DPF3Q92784 378 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC38A4Q969I6 547 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 RHBDF1Q96CC6 855 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 FCRL2Q96LA5 508 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 COQ7Q99807 217 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 BCL7BQ9BQE9 202 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 BRINP2Q9C0B6 783 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 OR51E2Q9H255 320 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 PDP1Q9P0J1 537 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms