RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 CCDC38Q502W7 563 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 PLEKHS1Q5SXH7 462 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 TMTC4Q5T4D3 741 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 C1orf189Q5VU69 101 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 RAD9BQ6WBX8 426 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 FAM20CQ8IXL6 584 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 PIANPQ8IYJ0 282 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 FAM71DQ8N9W8 422 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 OR52E1Q8NGJ3 308 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 DTX3LQ8TDB6 740 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 SPATA13Q96N96 652 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 ING2Q9H160 280 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 COG4Q9H9E3 785 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 ACSS2Q9NR19 701 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 CIDEBQ9UHD4 219 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 POMT2Q9UKY4 750 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 AAR2Q9Y312 384 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 COLEC10Q9Y6Z7 277 aa13.84□□□□□ -0.19
SMARCE1-205ENST00000431889 TCRBV7S2A1N4TA0A589 114 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 MEN1O00255 615 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 ITGALP20701 1170 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 PRDX3P30048 256 aaKnown RBP13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 GDF10P55107 478 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 SLC9A5Q14940 896 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 SKOR2Q2VWA4 1001 aaPredicted RBP13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 SNX20Q7Z614 316 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 ACVR1CQ8NER5 493 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 HM13Q8TCT9 377 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 CD180Q99467 661 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 SLC25A23Q9BV35 468 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 OR52A5Q9H2C5 316 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 MAP10Q9P2G4 905 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 SNX7Q9UNH6 387 aa13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 EPN1Q9Y6I3 576 aaPredicted RBP13.83□□□□□ -0.19
SMARCE1-205ENST00000431889 GRID2IPA4D2P6 1211 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 PTMAP06454 111 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 RALBP11234 206 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 CYP2A7P20853 494 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 PTMSP20962 102 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 ACRV1P26436 265 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 CYLC1P35663 651 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 ITGA1P56199 1179 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 RWDD2BP57060 319 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 ZNF789Q5FWF6 425 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 SYVN1Q86TM6 617 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 PRUNE1Q86TP1 453 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 KMT5CQ86Y97 462 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 DSELQ8IZU8 1212 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 OR5AR1Q8NGP9 310 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 LINC00615Q96LM1 132 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 CCM2Q9BSQ5 444 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 SLC7A5P2Q9GIP4 190 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 FAM60AQ9NP50 221 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 PCMTD2Q9NV79 361 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 ZDHHC3Q9NYG2 299 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 SMARCAL1Q9NZC9 954 aa13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 TDRKHQ9Y2W6 561 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-205ENST00000431889 SNRNP200O75643 2136 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 FER1L5A0AVI2 2057 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 STK10O94804 968 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 FTCDO95954 541 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 KLK3P07288 261 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 PGDP52209 483 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 DBN1Q16643 649 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 CYB5D1Q6P9G0 228 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 APLFQ8IW19 511 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 SYTL1Q8IYJ3 562 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 CCDC170Q8IYT3 715 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 C2orf73Q8N5S3 287 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 FDCSPQ8NFU4 85 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 ULK4Q96C45 1275 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 TMEM121Q9BTD3 319 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 GPR87Q9BY21 358 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 ACTR5Q9H9F9 607 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 SPHK1Q9NYA1 384 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 ACTR10Q9NZ32 417 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 IMPACTQ9P2X3 320 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 ICKQ9UPZ9 632 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 KLHL20Q9Y2M5 609 aa13.82□□□□□ -0.2
SMARCE1-205ENST00000431889 PRRC2CQ9Y520 2896 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 AGAP14A8MT82 685 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 CFAP99D6REC4 459 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 IFRD1O00458 451 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 ZNF749O43361 778 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 CAPN1P07384 714 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 RNF224P0DH78 156 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 OTX2P32243 289 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 RORAP35398 523 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 COPS2P61201 443 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 ATP1A4Q13733 1029 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 ZNF658BQ4V348 819 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 FAM198BQ6UWH4 519 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 ARHGEF18Q6ZSZ5 1173 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 AMIGO1Q86WK6 493 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 ADGRF3Q8IZF5 1079 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 FAM26EQ8N5C1 309 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 CPT1CQ8TCG5 803 aa13.81□□□□□ -0.2
SMARCE1-205ENST00000431889 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms