RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TIMM50Q3ZCQ8 353 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 PAGE3Q5JUK9 113 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 PIK3R6Q5UE93 754 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 KCTD11Q693B1 232 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 LCN8Q6JVE9 175 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 SLC24A5Q71RS6 500 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 PHF10Q8WUB8 498 aaKnown RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 SUSD3Q96L08 255 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 TNKS2Q9H2K2 1166 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 PLAC1Q9HBJ0 212 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 AIG1Q9NVV5 245 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 TEKT2Q9UIF3 430 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 A0A1B0GVM2 712 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 K7EPI3 171 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 TAF4O00268 1085 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 ACOT8O14734 319 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 URODP06132 367 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 PGRP06401 933 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 HSD17B1P14061 328 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 CDC42P60953 191 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 ANKS3Q6ZW76 656 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 RETREG3Q86VR2 466 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 BIRC8Q96P09 236 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 KAT8Q9H7Z6 458 aaKnown RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 H2AFY2Q9P0M6 372 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 TESMINQ9Y4I5 508 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 TCRBV3S1A0A5B6 114 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 TFECO14948 347 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 HOXA2O43364 376 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 DUSP11O75319 330 aaKnown RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 GPX3P22352 226 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 CTSKP43235 329 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 CASP9P55211 416 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 SERINC3Q13530 473 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 PDCD4Q53EL6 469 aaKnown RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 PDZK1Q5T2W1 519 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 LARP4Q71RC2 724 aaKnown RBP eCLIP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 GOLGA7Q7Z5G4 137 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 ARHGAP12Q8IWW6 846 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 GLB1L3Q8NCI6 653 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-201ENST00000429747 ARMC1Q9NVT9 282 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 GMEB1Q9Y692 573 aa12.42□□□□□ -0.42
CPNE4-201ENST00000429747 CYP11A1P05108 521 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 FYNP06241 537 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 POU2F1P14859 743 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 HLCSP50747 726 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 MADCAM1Q13477 382 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 DNASE1L3Q13609 305 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 UPP1Q16831 310 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 UBXN11Q5T124 520 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 LRRTM3Q86VH5 581 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 UMODL1-AS1Q8N2C9 162 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 FAR1Q8WVX9 515 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 TMEM248Q9NWD8 314 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 RAB23Q9ULC3 237 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 CD36P16671 472 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 PDE12Q6L8Q7 609 aaKnown RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 RNF111Q6ZNA4 994 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 AKAP14Q86UN6 197 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 CYP4Z1Q86W10 505 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 ZBTB8BQ8NAP8 495 aaPredicted RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 FUBP3Q96I24 572 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 KCTD5Q9NXV2 234 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 ANKRD66B4E2M5 251 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 LZTS3O60299 673 aaPredicted RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 XYLBO75191 536 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 ALDOCP09972 364 aaKnown RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 DDX5P17844 614 aaKnown RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 PRDX3P30048 256 aaKnown RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 SLC16A1P53985 500 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 CHIT1Q13231 466 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 C6orf141Q5SZD1 244 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 ADGRG5Q8IZF4 528 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 RHEBL1Q8TAI7 183 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 PGAP3Q96FM1 320 aaPredicted RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 ZNF599Q96NL3 588 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 C1QTNF1Q9BXJ1 281 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 SDR39U1Q9NRG7 319 aaPredicted RBP12.41□□□□□ -0.42
CPNE4-201ENST00000429747 PCDHGB5Q9Y5G0 923 aa12.41□□□□□ -0.42
CPNE4-201ENST00000429747 A0A0U1RQF3 1178 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 MANSC4A6NHS7 340 aaPredicted RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 MYL12BO14950 172 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 CREG1O75629 220 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 EPORP19235 508 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 FDXRP22570 491 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 EMX2Q04743 252 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 KCNA10Q16322 511 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 CPTPQ5TA50 214 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 DENND5AQ6IQ26 1287 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 EIF3MQ7L2H7 374 aaKnown RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 DEPDC4Q8N2C3 294 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms