RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CAND1Q86VP6 1230 aaKnown RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 SLC22A15Q8IZD6 547 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 BBOF1Q8ND07 529 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 OR5K2Q8NHB8 316 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 HMGCLL1Q8TB92 370 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 SEC14L1Q92503 715 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 C12orf66Q96MD2 445 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 LRFN5Q96NI6 719 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 SERPINB12Q96P63 405 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 RAB11FIP5Q9BXF6 653 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 PITPNM3Q9BZ71 974 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 FOXP3Q9BZS1 431 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 RDH14Q9HBH5 336 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 ARFGAP3Q9NP61 516 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 CHRAC1Q9NRG0 131 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 C1GALT1Q9NS00 363 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 SAMD15Q9P1V8 674 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 GNPTGQ9UJJ9 305 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 CORO1CQ9ULV4 474 aaPredicted RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 DNAJC16Q9Y2G8 782 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 ITPR1Q14643 2758 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 CELSR3Q9NYQ7 3312 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 OR52A4PA6NMU1 304 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 C9orf172C9J069 976 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 DNALI1O14645 258 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 GPR39O43194 453 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 ZBTB11O95625 1053 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 ITGB2P05107 769 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 APOA4P06727 396 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 ZSCAN5DPP0CG00 497 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 ETS1P14921 441 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 IVDP26440 423 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 MAP4P27816 1152 aaKnown RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 AOAHP28039 575 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 SHMT2P34897 504 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 CCNFP41002 786 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 ATP1A2P50993 1020 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 CLDN6P56747 220 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 GNG11P61952 73 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 ETF1P62495 437 aaKnown RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 HSD11B2P80365 405 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 VAC14Q08AM6 782 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 TMED2Q15363 201 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 RNASEH2BQ5TBB1 312 aaKnown RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 USP53Q70EK8 1073 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 CYS1Q717R9 158 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 CILP2Q8IUL8 1156 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 CNTN4Q8IWV2 1026 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 CFAP206Q8IYR0 622 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 D2HGDHQ8N465 521 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 FBXO15Q8NCQ5 510 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 OR6P1Q8NGX9 317 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 MAGEC3Q8TD91 643 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 NCSTNQ92542 709 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 TFGQ92734 400 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 KCNJ9Q92806 393 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 SLC22A18Q96BI1 424 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 SIGLEC10Q96LC7 697 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 RMDN2Q96LZ7 410 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 ZNF778Q96MU6 729 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 UBL7Q96S82 380 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 CCNL2Q96S94 520 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 AP1M1Q9BXS5 423 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 WWP1Q9H0M0 922 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 SUDS3Q9H7L9 328 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-203ENST00000428014 SMARCAL1Q9NZC9 954 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 POMT2Q9UKY4 750 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 KLK4Q9Y5K2 254 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 FAM169AQ9Y6X4 670 aa8.9□□□□□ -0.98
SMC1A-203ENST00000428014 COL6A6A6NMZ7 2263 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 SPTA1P02549 2419 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 ZCWPW2A0A1B0GU75 182 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 ERVH48-1M5A8F1 160 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 POLR1CO15160 346 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-203ENST00000428014 TMEM63AO94886 807 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 DLGAP3O95886 979 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 POLBP06746 335 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 ENO3P13929 434 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-203ENST00000428014 HSD17B2P37059 387 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 DRG2P55039 364 aaKnown RBP8.89□□□□□ -0.99
SMC1A-203ENST00000428014 TMPRSS15P98073 1019 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 ABHD18Q0P651 414 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 PRKAA1Q13131 559 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 CLN3Q13286 438 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 TUBB2AQ13885 445 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 KIR2DS3Q14952 304 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 ARHGAP19Q14CB8 494 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 ANKRD20A4Q4UJ75 823 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 TMTC4Q5T4D3 741 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 NEPROQ6NW34 567 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 GPR155Q7Z3F1 870 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 MAATS1Q7Z4T9 603 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 MARCH9Q86YJ5 346 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 DCUN1D3Q8IWE4 304 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 CNPY4Q8N129 248 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 ESX1Q8N693 406 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 CLDN19Q8N6F1 224 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 LPGAT1Q92604 370 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 MFSD3Q96ES6 412 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 MS4A14Q96JA4 679 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms